Gene Ping_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0475 
Symbol 
ID4626752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp601668 
End bp602087 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content41% 
IMG OID639795668 
Productfimbrial protein pilin 
Protein accessionYP_941931 
Protein GI119944251 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4969] Tfp pilus assembly protein, major pilin PilA 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.665132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAA GTCAATACAT GAAAAAAGCA CAGCAAGGTT TTACATTGAT TGAGCTGTTA 
ATTGTTATCG CGATTATCGG TATTTTGGCA GCAGTTGCGT TGCCTGCTTA TCAGAACTAT
GTACAAAAAT CAGAGGTAAG CGCGGGATTA GCTGAAATTA CGGGGGGGAA ACCTGGAATA
GTTCTTCAAG TTAGCGGGGG TAATGGGGCT AGTATTTCAG CCGCGACTAT AGGTCTTTCA
ACTCCGACTC AAACTTGTAC CATCACTGCC GATAACACTG GGGTTACATG TACATACCTG
AATACAGCTA TCAATACCGG TACTTCTGCT CTTAAATTAG AGTACTCAGC TGCTTCAGGA
ACATTTTCAT GTGACGCAAC TAATATAGAT GACAATTTAC TGCCTAAAGG TTGTTCGTAG
 
Protein sequence
MVKSQYMKKA QQGFTLIELL IVIAIIGILA AVALPAYQNY VQKSEVSAGL AEITGGKPGI 
VLQVSGGNGA SISAATIGLS TPTQTCTITA DNTGVTCTYL NTAINTGTSA LKLEYSAASG
TFSCDATNID DNLLPKGCS