Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0475 |
Symbol | |
ID | 4626752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 601668 |
End bp | 602087 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639795668 |
Product | fimbrial protein pilin |
Protein accession | YP_941931 |
Protein GI | 119944251 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.665132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAAAA GTCAATACAT GAAAAAAGCA CAGCAAGGTT TTACATTGAT TGAGCTGTTA ATTGTTATCG CGATTATCGG TATTTTGGCA GCAGTTGCGT TGCCTGCTTA TCAGAACTAT GTACAAAAAT CAGAGGTAAG CGCGGGATTA GCTGAAATTA CGGGGGGGAA ACCTGGAATA GTTCTTCAAG TTAGCGGGGG TAATGGGGCT AGTATTTCAG CCGCGACTAT AGGTCTTTCA ACTCCGACTC AAACTTGTAC CATCACTGCC GATAACACTG GGGTTACATG TACATACCTG AATACAGCTA TCAATACCGG TACTTCTGCT CTTAAATTAG AGTACTCAGC TGCTTCAGGA ACATTTTCAT GTGACGCAAC TAATATAGAT GACAATTTAC TGCCTAAAGG TTGTTCGTAG
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Protein sequence | MVKSQYMKKA QQGFTLIELL IVIAIIGILA AVALPAYQNY VQKSEVSAGL AEITGGKPGI VLQVSGGNGA SISAATIGLS TPTQTCTITA DNTGVTCTYL NTAINTGTSA LKLEYSAASG TFSCDATNID DNLLPKGCS
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