Gene Ping_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0454 
Symbol 
ID4623635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp576328 
End bp577482 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content36% 
IMG OID639795648 
Productglycosyl transferase, group 1 
Protein accessionYP_941911 
Protein GI119944231 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0138667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAAAAA AAATAAATAT TGTCCACTAT TGGGGTGGGT GTCCGAATGT TGCAACGTCG 
AAAGAGCTTA GTTTTTTGAT GTTAATTAAA AAATGCGCTG AACATGGCTG GAATAATTGG
TTAGTGTTAT CAAAATACCC TGAGAACTCT GAATTGATTG ATCCTATCCT ACAAACTGGT
TGTGAAATTA TTTATCAACC AAGATCTAAA GGTAATTTTG ATCCCGCGAG TATTTATTGT
AATTTTAAGC TCCTTTGGGG AATAAAATGT CATGTATTTC ATTGCTATAA CGATCATACC
AGCCCAATCA TAGCCGCTAT GTTTGCGAGG GTTCCTATTA GAGTGTGGTC TAAATTAGCA
ATGTCCTCTT ATTATGAGCA AGGTATTACC CCTAAAGGTT TGCAAAGGCT AATGCCAAGT
ACTTGGATTA CTTGCTTGTT TTCGAATCGA ATATTGGCAA TAAGTGATGC AGCAGGAAAA
GAAATATATG AACAAGTCGG TTTTAAAAAT AAAGTAGCCA CAGTTCAAGT ACCTGTGTCA
CTTGAACGAT TCATGACAAT AACAGGTGCT GGTATAAGAG ATGAATTTAA TCTTCAACAA
TCAGATATTG TTATTACTGC TGTTGGTCAT TTCATTGAGG TAAAAGGGTG GGACATCGCA
ATAAAAGCCT TTGCAAGGGT TTATAAAGAA ATTCCAAATG CAAAACTGTT ATTGGTTGGG
AAAAAAACAT CTGTAGAATT CTATCAAAAA ATATGTTTGC AAATTGAGCG ATATGATTTG
CAAAAGCATG TGTTTTTTGC GGGTAATCGT AGCGATATTC CTGAAATTCT TAAGGCAAGT
AACATCTTCA TTCTACCTTC ACGCTCAGAG GGTACGCCTG CTGCGCTTAT TGAGGCAATG
GCTGCCGGTT TACCATGCAT TGCTGCTGAA ACAGGAGGCA TTCCCGAAGT TATAGTTCAC
GGTAATAATG GTCTTATGTT TCGAAGGGAA GATGCCGAAG ATCTAGCTGA TAAAATTGTA
TGTTTGCTCT CTGATTCAGA GCTTAGGCTT CAACTAACTA AAATGGCACA GAAAAACTTG
GAAAAATTTT CTATAGAAAA TTATGTGGAT AGCGTCTTTT CTCACTATCA GAATCTGCTT
AAATATTATG ATTAA
 
Protein sequence
MQKKINIVHY WGGCPNVATS KELSFLMLIK KCAEHGWNNW LVLSKYPENS ELIDPILQTG 
CEIIYQPRSK GNFDPASIYC NFKLLWGIKC HVFHCYNDHT SPIIAAMFAR VPIRVWSKLA
MSSYYEQGIT PKGLQRLMPS TWITCLFSNR ILAISDAAGK EIYEQVGFKN KVATVQVPVS
LERFMTITGA GIRDEFNLQQ SDIVITAVGH FIEVKGWDIA IKAFARVYKE IPNAKLLLVG
KKTSVEFYQK ICLQIERYDL QKHVFFAGNR SDIPEILKAS NIFILPSRSE GTPAALIEAM
AAGLPCIAAE TGGIPEVIVH GNNGLMFRRE DAEDLADKIV CLLSDSELRL QLTKMAQKNL
EKFSIENYVD SVFSHYQNLL KYYD