Gene Ping_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0449 
Symbol 
ID4623630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp571753 
End bp572757 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content36% 
IMG OID639795643 
Productglycosyl transferase family protein 
Protein accessionYP_941906 
Protein GI119944226 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0213418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00105166 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAAGTG AAATATTTGT ATCTGTCGTT TTGATTGTAA AAAACCAGAC AGATAAACTA 
ATAAACTATT TAGATAAACT TTCCCCCTAT TTGAATGAGC AATATAATGA CTATGAAGTT
GTCATTATCG ACGAAAAATC TACTGATGAT ATTGAACATA AATTAAGAAA ATCACTCGAG
ACTCATCAAT CTATACGCCA TATTCGCCTA TCACAAGAAG TGAGCACTGA TGTGGCGTTA
GCGGCTGGAA TAGAGAATGC GATCGGTGAT TTTGTTGTGA ATCTGAATAT CCTAACAGAC
CATCCTGAAC TGGTGAATGC TCTGCTAGAA AGCGGACTTG CCGGGAATGA TGTTGTGGTT
GGTGTTTCTC AAAAAATAAA CTCTTTCATA TATCGGCATT TAAGAAAACT TTCGACATGG
TTACTAAAGT CTATTGGTTA TAGCCTACCA AGTAATTCAA CGGGTACTTT TTGCTTTAGT
CGCCGGGCTG TAAATGCCAT TACAGAATCA GGTCGATTTT ACTGTAAGTT ACATTTAAAA
ATAGCGAATA CTGGTTATAC ATTATCTCCT TTTCTTTGTG ATGACTTCAT CAGTAATACA
CATAAAAAAA GTCTCACTCA CGGTATAAAA GAAACGCTCC ATCACATGGT CTTTAATTCA
ACAAAACCGC TTCGCTGGAT GAGTGCTCTT GGTATATTTG GCAGCCTTAT GGCAATGTTA
TTCTCGTTCT ATAGTCTGAT CGTTCATTTT ATTAATGATC AAGTTGCACC CGGTTGGACA
ACAACAATTT TATTCATGTC CTTCTTGTTT GCGATGATGT TTACCATGCT TTCATTCTTT
GGTGAATATT TAGCCAGATT GTTAAATGAT CGAAGTGAAC ATAAAGAATA CAATATCGTT
TATGAGCGAA ATAGCTCTGT GATGTTAGAT GAAGATCGCA GTAATGTGTT ATTTACTTCT
TTGGGTGAAA GTGTAAACAA CAGCCAAACA GGTAGAAATC GATGA
 
Protein sequence
MKSEIFVSVV LIVKNQTDKL INYLDKLSPY LNEQYNDYEV VIIDEKSTDD IEHKLRKSLE 
THQSIRHIRL SQEVSTDVAL AAGIENAIGD FVVNLNILTD HPELVNALLE SGLAGNDVVV
GVSQKINSFI YRHLRKLSTW LLKSIGYSLP SNSTGTFCFS RRAVNAITES GRFYCKLHLK
IANTGYTLSP FLCDDFISNT HKKSLTHGIK ETLHHMVFNS TKPLRWMSAL GIFGSLMAML
FSFYSLIVHF INDQVAPGWT TTILFMSFLF AMMFTMLSFF GEYLARLLND RSEHKEYNIV
YERNSSVMLD EDRSNVLFTS LGESVNNSQT GRNR