Gene Ping_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0448 
Symbol 
ID4623629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp569828 
End bp571756 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content34% 
IMG OID639795642 
Producthypothetical protein 
Protein accessionYP_941905 
Protein GI119944225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.341791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00166798 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAATTAA AAATAACTAT AATATTACTT GGCTTTTATT GTATTTTTAT CAATGCACTA 
ACGGGGTCAA TTCTTGTACC AACGTTTCAC TTGGATGGTG CTTTTCAGAC TGCCAGTGGT
TTATTTCGCC TAGACTCAGG ACAACTACCG GGGAAAGATT TTTTCCCCTA TTTAGGTATC
GGCCCCATTT TAATAATTTT CCCTGTTTTT AAACTGGCAG GAAGTGATCT CATTGCAAGT
TCATTTTCAA CACTATTTGT CACAAGAGTT TTAGCCTGGG TTTCTGTGTC ACTAGTTGTG
CATTTAATTT TAAGAAGTAA ATCGTTTATA TCATCACTCT GCATAGGAAT AATTCTGTTG
ATAATCCTTA TAGGAATTGA CAAGAGTGGA TTTTTCATCA ATAAACCATT TTCTTTTTTA
ATCGACCCAG GCACCTCATT AAGACCAGTG AGGGCTTCTG CACCCTATTT GCTTGGAATA
CTCAGCTATT TTATAGTAAC CACTTCCATC CCCTATTCTT TAAAAAAGTA TTTGGCTGGA
GTATCAGCGG GTATATTTCT GCTTTGGTCA AATGACTATG CATTACCAAC AGTTGCAACG
TTTTCTCTAT TTTTTTGTAT TTACTTTTAT AAAAATTCTG CAACTAACTG GCTCAAAGAT
GCGCTAGTAT TTTCCTTAAT TTTAATATCA ACATGGCTAG TGCTTTTGTT GTTGATAACC
GCGGGACATC CATTAGAGTT ATTAAAATAT AATTTCAGAG ATGTTGCGAC TGATCAATGG
TGGTATTTCA GCCCTTATTA CGATCGTATA TTCCATTTAT CAGACCTTGG AAAATTGATA
AATGCAGATC TACTCATACT ACTAGTATTT TCCATTTATG CTTACAAGAC AAAATACATT
GAATCAATAA TTTTATGTAT AATTGGTTTT GCCCTATTCT TTGGCGGAGT CCTTGCATCT
ATAGGCGGCC ACTTTACCAA AATTTATTTT AACGCTTATC ATGCTTGGGC AATAATAATA
GCTATTATTT TCACAATAAA CTTAATTGTT AAATTAATTA GTAAAAATAT CCAATCAAAT
CAAATTTTAT TCCTAAGAAA CTTAGTCAGC CCTAGCATTA TAATTTGCCT ACTTATGGTA
GCTTCGGCTG GCTCCTATAA GTATTATCGT AATTTAAATA GTGTTCAAAA CAATAAGTAT
TTTTATTATA TTGATGAGTT TGGAGGGTAC TTAAATGTTA AGTGGAAAGA CTATATAGAG
TTCATTAAGC TTAATAAACA CAAACCTATC ATTGAGGAAT ATTGGGGCTT AGCCAGTGCA
TTAAATAGAA CATTCTCACC CTGGCCCGTT GATTCGGTTA TTCATGCTTT AGGTGACGTG
AGAAAAAAAG CCCAAGATAG CTTGGTTAAG GCAGATTATA TAATCACTTC AAAAAATGGT
AATTTTTCCA TTTGGCAACC TTGGAGCGTA AGCCAAAATT TTTGGTTTTA TAAAACGTTA
TTTTCAGAAT GGGAACCCAT TTTTCACTCA CCTGCAACCA CCATTTGGAA AAAGCTCCCA
CATAAGCGAA CAGAGCAAAA TGTGGAATGT GAAATTACTA AAAATAGAGA TGCATTTACC
ATAAAAACAG ATAAAACCGG TTTAATTAAT GTGAAGCTGA ATTATTCAAT AACCGCTAAA
GGCCGTTACT TATCTATGGT AAAAAACAAT TTATCCTATG CTTCTGATGC TGCCGGCTAT
GTTTCTATAA ATCCAAAATC AGATAATGCC TTTTTTCCAG TCCTTAGCAA AGGAGATGAG
AATGAAATTT ATGATGCGAA AATTGTTGGT AGCGATAATG GTGAAATAAT TATCGAGTCA
TGTGAAGCGT CTCGATTTAT CATTGACCTT GACGATGAGG ATGAAATTTA CCCTTCAGTC
TTTAAATAA
 
Protein sequence
MKLKITIILL GFYCIFINAL TGSILVPTFH LDGAFQTASG LFRLDSGQLP GKDFFPYLGI 
GPILIIFPVF KLAGSDLIAS SFSTLFVTRV LAWVSVSLVV HLILRSKSFI SSLCIGIILL
IILIGIDKSG FFINKPFSFL IDPGTSLRPV RASAPYLLGI LSYFIVTTSI PYSLKKYLAG
VSAGIFLLWS NDYALPTVAT FSLFFCIYFY KNSATNWLKD ALVFSLILIS TWLVLLLLIT
AGHPLELLKY NFRDVATDQW WYFSPYYDRI FHLSDLGKLI NADLLILLVF SIYAYKTKYI
ESIILCIIGF ALFFGGVLAS IGGHFTKIYF NAYHAWAIII AIIFTINLIV KLISKNIQSN
QILFLRNLVS PSIIICLLMV ASAGSYKYYR NLNSVQNNKY FYYIDEFGGY LNVKWKDYIE
FIKLNKHKPI IEEYWGLASA LNRTFSPWPV DSVIHALGDV RKKAQDSLVK ADYIITSKNG
NFSIWQPWSV SQNFWFYKTL FSEWEPIFHS PATTIWKKLP HKRTEQNVEC EITKNRDAFT
IKTDKTGLIN VKLNYSITAK GRYLSMVKNN LSYASDAAGY VSINPKSDNA FFPVLSKGDE
NEIYDAKIVG SDNGEIIIES CEASRFIIDL DDEDEIYPSV FK