Gene Ping_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0397 
Symbol 
ID4624297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp505166 
End bp506230 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content41% 
IMG OID639795593 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_941857 
Protein GI119944177 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0180892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATTT TAGATCGTTA CATAGGCAAA ACAATTTTTG CAGCCACTTT TTTGAGCCTG 
TTTGTATTGA TAGGATTGAG CAGTATCATT AAATTTGTTG AGCAGATGGG AAGCATTGGG
GTGGGCTCCT ACGATGCCTG GAATGCGGCC TATTTTGTTA TTCTAAAAAT TCCTATTGAG
TTATCAGTTT TTTTTCCGAT GGCAGCCTTG ATTGGTGCAT TGATTGGTTT AGGGAGTTTG
GCGAATAGCA GTGAACTGGT TGTTATGCAG GCCGCCGGCA TATCAAAATT ACGGATTGCA
GGCGCCGTAT TAAAAACAGC TATTCCAATG GTGATCGTAG TAATGGTATT GACTGAATTT
GTTGTGCCCA TAACAGATAA AGAAGCCTAT TCTATGCGTT ATATGGCAAA AAGAGGCGAG
GTACAGGTCA GTAATCAATA TGGGGTTTGG GTGAAGGATG CGGATTCATT CGTCAGTATT
GAACGGATGA ACAGTAAGAA TGAACTCTTT CATGTACAAC TGTACTTTTT TGATGAAAAT
TTAAAACTTG ATCATGCCAT TCTGGCGCGT AAAGCAGCCT TTAAAGAAGG GAGTTGGTTC
TTTGGAGATG TTAGCCAAAC CAATTTTTTG GAAGATAGAA CAGAGGTTAA GCGAATGAGT
AATTATATTT GGGAGACTAA GCTAACACCG AAAAAACTGG AAGTCATTTT GGGTGAACCG
GATAAAATGT CGATGCGCGA TATTTATAAT TACATCATCT ACCTTGAAAA TAATGAGCAG
GATGCAAAGC GTTTCTGGCT GATATTTTGG CGTAAAGCCG TCCTGCCTTT TACCATTGTG
GTAATGATGT TACTGTCGGT TTCTTTTATA TTTGGTGGCT TACGCAGCGT AACAATGGGT
ACCCGTTTAA TTTTTGGTAT CGCTGCCGGT TTTACTTTCT ATGTTTCAGG GGAGTTATTT
GGCCCCTTCA GTTTAGTCTT TAACTGGCCA CCGATACTGG GCGCATTATT ACCGAGTTTT
CTAGTGTTAT CTCTGGCCCT CTACCTGCTT AAGCGGCAAA GCTAA
 
Protein sequence
MGILDRYIGK TIFAATFLSL FVLIGLSSII KFVEQMGSIG VGSYDAWNAA YFVILKIPIE 
LSVFFPMAAL IGALIGLGSL ANSSELVVMQ AAGISKLRIA GAVLKTAIPM VIVVMVLTEF
VVPITDKEAY SMRYMAKRGE VQVSNQYGVW VKDADSFVSI ERMNSKNELF HVQLYFFDEN
LKLDHAILAR KAAFKEGSWF FGDVSQTNFL EDRTEVKRMS NYIWETKLTP KKLEVILGEP
DKMSMRDIYN YIIYLENNEQ DAKRFWLIFW RKAVLPFTIV VMMLLSVSFI FGGLRSVTMG
TRLIFGIAAG FTFYVSGELF GPFSLVFNWP PILGALLPSF LVLSLALYLL KRQS