Gene Ping_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0376 
Symbol 
ID4624182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp481833 
End bp482909 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content42% 
IMG OID639795572 
ProductA/G-specific adenine glycosylase 
Protein accessionYP_941836 
Protein GI119944156 
COG category[L] Replication, recombination and repair 
COG ID[COG1194] A/G-specific DNA glycosylase 
TIGRFAM ID[TIGR01084] A/G-specific adenine glycosylase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.798144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCACG AAGATTTTAG TCAACGCATC ATCGCATGGC ATCAAAAATT TGGCCGTAAA 
ACATTACCCT GGCAACAGGA TAAAAGTCTT TATCGAACAT GGGTGAGCGA AGTCATGCTG
CAACAAACAC AAGTTGCCAC TGTGATCCCC TATTTTAATA AGTTTATGCG TGCTTTTCCA
ACTATCTCAT ACCTTGCCAA TGCGCCTTTA GATGAAGTAT TGCATCACTG GACTGGACTC
GGCTACTACG CCAGAGCGCG TAATTTACAT AAAAGTGCGC AATTTATTCG TGATAATTAT
GCAGGGGATT TTCCGGAAGA GTTTCAACAA GTGCTGGATT TACCCGGGAT TGGACGATCC
ACTGCAGGGG CTATTTTATC TCTGACCTTG AATCAAAACT TTGCTATTTT AGATGGTAAC
GTCAAACGTG TCCTCACTCG CCATCAAACT ATTGAAGGCT GGACAGGTGG AAAGTCCGTT
GAAAATACCC TATGGCAACT TGCTGAAAAA CTAACACCGG CAAAACAGAC CAACATATTT
AATCAGGCCA TGATGGATAT GGGGGCAATG GTTTGCACGC GCAGTAAAGC AAATTGTGTA
GAGTGCCCTG TTCAGGACGA TTGTTTAGCG CTTGCTGACG GGACAGTGAA AGCTTACCCG
ACACCCAAAG CTAAAAAGAA GATTCCAATA AAAACAGCTG TGATGCTGGT ACTGTGCAAA
GACGGTAAAA CACTGCACTT AAAAAAACGT CCACCGGTAG GTATCTGGGG TGGATTATGG
TGTTTTCCCG AATATGAAAG TGAAGCATTA TGTCTGGCAG CTATTCAAGC ACAGGGCATT
GAACAGTTTA ACAGCACCCT GTTACCCGCA TTTCGTCATA CTTTTAGCCA TTTTCATTTT
GATATAACCC CGCTAAAAAT TGACGTTTCG ATCATAGACA CAAAACAAGT AATGGAAGAA
AATGACACTC TTTGGTATAA CTTACACCAC CCACAAAAAA TTGGGTTAGC AGCAGCAACA
ACAAAAATTA TAACCGCTGT TAACAAAAAC CTCTCAAAGG AGAAGATAGA TGACTAG
 
Protein sequence
MNHEDFSQRI IAWHQKFGRK TLPWQQDKSL YRTWVSEVML QQTQVATVIP YFNKFMRAFP 
TISYLANAPL DEVLHHWTGL GYYARARNLH KSAQFIRDNY AGDFPEEFQQ VLDLPGIGRS
TAGAILSLTL NQNFAILDGN VKRVLTRHQT IEGWTGGKSV ENTLWQLAEK LTPAKQTNIF
NQAMMDMGAM VCTRSKANCV ECPVQDDCLA LADGTVKAYP TPKAKKKIPI KTAVMLVLCK
DGKTLHLKKR PPVGIWGGLW CFPEYESEAL CLAAIQAQGI EQFNSTLLPA FRHTFSHFHF
DITPLKIDVS IIDTKQVMEE NDTLWYNLHH PQKIGLAAAT TKIITAVNKN LSKEKIDD