Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0343 |
Symbol | |
ID | 4626720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 444606 |
End bp | 445484 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639795541 |
Product | D-ribose transporter subunit RbsB |
Protein accession | YP_941808 |
Protein GI | 119944128 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATAT TTACTAAACT GATTACCGCA GCTGTTATTT CAGCTTCTTT CAGTGCCGGT GCGATGGCTC AAGATACTAT TGCTATGGTT GTTTCAACCT TAAATAATCC CTTTTTTGTG AGTATGAAAG AGGGGGCTGA GGATAAGGCA AAGGAACTAG GCTATGAGCT GATTGTGCTT GATTCACAAA ATGACCCCAG CAAAGAGTTA TCAAATGTTG AAGATCTTGT TGTTCGAGGC GTCAAAGCGA TCTTAATCAA TCCGACTGAT TCCGATGCGG TGACCAATGC GATTCGCATT GCTAATCAAG CTGATATTCC GGTGTTAACA CTCGACCGTG GTGCAGCAGG CGGTGATGTT GTTACTCATA TTGCATCGGA TAACATAGCC GGTGGCGAAA TGGCTGGTAA ATTTATTAAT GATAAAATCG GCAAAAATGC CAAAGTGGTA CAGCTGGAAG GTATTGCCGG TACATCGGCT GCGCGTGAGC GTGGTGAAGG ATTCATGAAA GCTGTTAGCA CCTACAACAT GGATTTGTTA GCCAGCCAAC CTGCCGATTT TGACCGTACC AAAGGTCTGA ATGTAATGGA AAATCTTCTT GCCTCTAATC CGGACACCCA AGCTGTATTT GCCCAAAATG ACGAAATGGC ATTAGGGGCT ATTCGTGCCG TGCAGGCATC GGGCAAAAAA ATATTAGTGG TTGGTTTTGA TGGAACAGAA GGTGGTATTG CCGCTGTAAA ACGCGGATCG CTTGGCGCAA CTATTGCTCA ACAGCCTCGT ATGATTGGTT CTCTCGGAGT TGAATCTGCA GCAAAAGTAC TTAAAGGTGA AGCTGTTGAA AAATACATTC CAGTATCATT AATGATGATT GTTAAATAA
|
Protein sequence | MKIFTKLITA AVISASFSAG AMAQDTIAMV VSTLNNPFFV SMKEGAEDKA KELGYELIVL DSQNDPSKEL SNVEDLVVRG VKAILINPTD SDAVTNAIRI ANQADIPVLT LDRGAAGGDV VTHIASDNIA GGEMAGKFIN DKIGKNAKVV QLEGIAGTSA ARERGEGFMK AVSTYNMDLL ASQPADFDRT KGLNVMENLL ASNPDTQAVF AQNDEMALGA IRAVQASGKK ILVVGFDGTE GGIAAVKRGS LGATIAQQPR MIGSLGVESA AKVLKGEAVE KYIPVSLMMI VK
|
| |