Gene Ping_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0343 
Symbol 
ID4626720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp444606 
End bp445484 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content43% 
IMG OID639795541 
ProductD-ribose transporter subunit RbsB 
Protein accessionYP_941808 
Protein GI119944128 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAT TTACTAAACT GATTACCGCA GCTGTTATTT CAGCTTCTTT CAGTGCCGGT 
GCGATGGCTC AAGATACTAT TGCTATGGTT GTTTCAACCT TAAATAATCC CTTTTTTGTG
AGTATGAAAG AGGGGGCTGA GGATAAGGCA AAGGAACTAG GCTATGAGCT GATTGTGCTT
GATTCACAAA ATGACCCCAG CAAAGAGTTA TCAAATGTTG AAGATCTTGT TGTTCGAGGC
GTCAAAGCGA TCTTAATCAA TCCGACTGAT TCCGATGCGG TGACCAATGC GATTCGCATT
GCTAATCAAG CTGATATTCC GGTGTTAACA CTCGACCGTG GTGCAGCAGG CGGTGATGTT
GTTACTCATA TTGCATCGGA TAACATAGCC GGTGGCGAAA TGGCTGGTAA ATTTATTAAT
GATAAAATCG GCAAAAATGC CAAAGTGGTA CAGCTGGAAG GTATTGCCGG TACATCGGCT
GCGCGTGAGC GTGGTGAAGG ATTCATGAAA GCTGTTAGCA CCTACAACAT GGATTTGTTA
GCCAGCCAAC CTGCCGATTT TGACCGTACC AAAGGTCTGA ATGTAATGGA AAATCTTCTT
GCCTCTAATC CGGACACCCA AGCTGTATTT GCCCAAAATG ACGAAATGGC ATTAGGGGCT
ATTCGTGCCG TGCAGGCATC GGGCAAAAAA ATATTAGTGG TTGGTTTTGA TGGAACAGAA
GGTGGTATTG CCGCTGTAAA ACGCGGATCG CTTGGCGCAA CTATTGCTCA ACAGCCTCGT
ATGATTGGTT CTCTCGGAGT TGAATCTGCA GCAAAAGTAC TTAAAGGTGA AGCTGTTGAA
AAATACATTC CAGTATCATT AATGATGATT GTTAAATAA
 
Protein sequence
MKIFTKLITA AVISASFSAG AMAQDTIAMV VSTLNNPFFV SMKEGAEDKA KELGYELIVL 
DSQNDPSKEL SNVEDLVVRG VKAILINPTD SDAVTNAIRI ANQADIPVLT LDRGAAGGDV
VTHIASDNIA GGEMAGKFIN DKIGKNAKVV QLEGIAGTSA ARERGEGFMK AVSTYNMDLL
ASQPADFDRT KGLNVMENLL ASNPDTQAVF AQNDEMALGA IRAVQASGKK ILVVGFDGTE
GGIAAVKRGS LGATIAQQPR MIGSLGVESA AKVLKGEAVE KYIPVSLMMI VK