Gene Ping_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0287 
SymboltyrA 
ID4624538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp374087 
End bp375214 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content43% 
IMG OID639795484 
Productbifunctional chorismate mutase/prephenate dehydrogenase 
Protein accessionYP_941752 
Protein GI119944072 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase
[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01799] chorismate mutase domain of T-protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTAA GTAAATTAAG AGATCAAATT GATGCCGTTG ATCAGCAGAT AATTGACCTG 
CTTGCTGAGC GTCTGCGTTT GGTTGGTGAA GTGGGTGAGG TTAAAGCCAA GCATGGTTTA
CCTATTTATG TTCCTGAGCG TGAAGCGGCT ATGCTGGCTA AACGCCGCGA GGAAGCATCA
TCTAAAGGCG TGCCGGCCAA TTTAATCGAG GATATCCTGC GCCGTACAAT GCGCGAATCC
TACGCCAGTG AAAATGATAC TGGCTTTAAA ACGGTTAATC CAAAGATGAA AAGAATTGTT
ATCATTGGTG GGAACGGCTT ATTAGGTCAG CGTTTTGTGG AAATGTTTAA GCTATCAGGC
TATGAAGTTG ATATTCTAGG ACGTGCTAAT TGGGACAAGG CAGAGGAGAT ATGCAGTCAT
GCAGGTCTGG TTATTGTCGG TTCACCCATT GATGTCACTG TCTCAGTTAT CGAGCAACTG
AGCTATCTCC CCGAAGATTG TATATTAGCT GATATTACCA GCGTAAAAGA TGGACCGTTA
CAGGCAATGC TGAAGGTGCA TAAAGGACCG GTTGTTGGTT TACATCCTAT GTTTGGTCCT
GATATTAGCA GTTTTGCCAA GCAGGTTGTT GTTTATTGTA ATGGTCGGGG TGAAGAGAAG
TACCAGTGGT TAATCGAACA GATGAAAATC TGGGGAGCGC ATCTTTATAA CGTTGACTCG
ACAGTTCACG ATGAGTCGAT GACCCTGATT CAAGCATTAC GACACTTTAC GAGTTTTGTC
TACGGAAGCC ATTTAAAAGA AGTTAATGCT GATTTAAAAC AGTTGTTAGA TTTAAGCTCC
CCAATTTATC GTTTGGAGCT GGCGATGGTC GGACGCTTGT TTGCGCAGGA TCCTGCTTTA
TATGCCGATA TTATTCTTTC ACAAAAAAAT AATCTGGTGA TGATCAAACG TTATCATCAG
CATTTTGCCG AGGCGATTGA GTTACTTGAA AATGCGGATC GGGAGCAGTT TATTAAACGT
TTTGAATCGG TAACCGAATG GATGGGGGAT TACTCTTCTC TTTTTCTTGA TGAAAGTCGT
TCGCTACTGC AGCAGGCCCA TGATAATCGC CATTACGAAG ATAAATAA
 
Protein sequence
MPLSKLRDQI DAVDQQIIDL LAERLRLVGE VGEVKAKHGL PIYVPEREAA MLAKRREEAS 
SKGVPANLIE DILRRTMRES YASENDTGFK TVNPKMKRIV IIGGNGLLGQ RFVEMFKLSG
YEVDILGRAN WDKAEEICSH AGLVIVGSPI DVTVSVIEQL SYLPEDCILA DITSVKDGPL
QAMLKVHKGP VVGLHPMFGP DISSFAKQVV VYCNGRGEEK YQWLIEQMKI WGAHLYNVDS
TVHDESMTLI QALRHFTSFV YGSHLKEVNA DLKQLLDLSS PIYRLELAMV GRLFAQDPAL
YADIILSQKN NLVMIKRYHQ HFAEAIELLE NADREQFIKR FESVTEWMGD YSSLFLDESR
SLLQQAHDNR HYEDK