Gene Ping_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0280 
Symbol 
ID4624531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp366571 
End bp367218 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content44% 
IMG OID639795477 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_941745 
Protein GI119944065 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0488759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA AATTAGTTAC AGCATTAATG GTCGTCACAC TTTTAAGCGG ATGTGTGAAT 
CGTCAAAATG CAACAACAGG TGAACAAGAA ATGAATACCG CGACAAAATC GGCTATTGGT
GGTGCAATTG CCGGGGCGCT TGCGGGTGCT GCGACAGGCA AAAAAAATGG CGCATTATTT
GGCGCGGTTG GTGGTGCTGC CATCGGTGGC GGGGTAGGTT ATTACTTTGA CCAACAAGAA
GCAGCACTAC GCCAGGAATT ATTAAATTCC GGAGTGCAGG TCAAGCGTGT TGGCGAATAT
GAACTGCAGC TTATAATGGC GGATGGCATT GGTTTTGATA CGGGGAATTA TCAGTTAAGC
GGTAGTATTT TTTCAACTTT AAATGGCGTT GCAAAAGTAC TTAATGAGTA TCCAAAATCA
TCATTAAGAA TCATTGGCCA TACGGACAGT GTTGGCAGTT CAGAATCAAA CTTAACCCTT
TCTGAGCGTC GTGCTGAATC TGTGTCTAAT TACCTTATGC AGCGCAACGT AAAATCGGGT
CGCCTAAGCA CATTAGGCTA TGGTGAACGT CGCCCGATAG CAACTAATGA TACTCCTTAT
GGCCGTGCGG CTAATCGTCG TGTTGAAATT AACATTATAG CTAACTAA
 
Protein sequence
MNKKLVTALM VVTLLSGCVN RQNATTGEQE MNTATKSAIG GAIAGALAGA ATGKKNGALF 
GAVGGAAIGG GVGYYFDQQE AALRQELLNS GVQVKRVGEY ELQLIMADGI GFDTGNYQLS
GSIFSTLNGV AKVLNEYPKS SLRIIGHTDS VGSSESNLTL SERRAESVSN YLMQRNVKSG
RLSTLGYGER RPIATNDTPY GRAANRRVEI NIIAN