Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0256 |
Symbol | |
ID | 4626643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 333141 |
End bp | 334229 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639795454 |
Product | naringenin-chalcone synthase |
Protein accession | YP_941722 |
Protein GI | 119944042 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3424] Predicted naringenin-chalcone synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.524336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAGCA GTATTAGCGC AATTGGAACC GCAGTGCCAC AACACAAATT CAAGCAAAGT GAAGCCGCAG CGCTCATTTC AGAACGGCTG CAATTGAGTC CCGCAAAAAA AAGAATGCTT AGGTCCATTT ATAAAGCGAC GGGTATTGAA TCGCGGCATA GTGTGATCAG CGATATGGGG CATCTCTCAA ATTCCAGAAG TGACATATCA TCACCTGATT TAAGCACAGC AGGCCGTATG GCTCTTTATA AAGAGCATGC GCTGCCGTTA GCCATTTCTG CTATCAAGCA ATGTATGGAT CAATCCGATG CCACATTCGC CGATATCACA CATGTGATTA CAGTCAGTTG TACAGGCATG TATGCCCCCG GATTAGATAT TGAAATTGTG CAGCAATTAA AGCTGCGCAC CAATGCTAAA CGCACGGCAA TCAATTTCAT GGGATGTTAT GGCGCCTTCA ACGCGTTGAA AGTGGCAGAT GATATCTGTC GCGCGAATAA AGGGGCTGTT GTTTTAATTG TGAGTGTTGA ACTTTGCAGT CTGCATTTTC AAAATGATGA AGATTTGGAT CACTTACTTT CAAATGCGAT TTTTGCAGAT GGTGCCGCAG CGGCTCTTAT TCAGCCGATG GCAGAGAATC AAAAAAGCCT ATCGATAGAG GCCTTCAATT GTGATTTATT ACCACAGACC AGCGAAGATA TGGCATGGCA TATAGGAGAT TCAGGATTTG ATATTGTTTT AAAATCCTAC ATCCCAGAAG TGATTGAGTC AGGGATCGCA GAGTTTATGG ATAAACTATT GAGACAGGAA GCGATCACCG AAGTTAATCA CTATGCCATT CATCCAGGCG GTATGAAAAT ACTACAAGCC TGTGAAACGG CCTTGAATAT TACAAAAGAC AAAAACAAGC ATGCTTATCA TGTGATGCGT GAGTATGGAA ATATGTCATC AGCCACCATT TTGTTTGTTT TGAAAGAATT GATGACCCAT TTGACGGTTA ATAATCATCA AGAAACTATT TTTAGTTGCG CTTTTGGACC GGGATTAACC TTAGAATCAA TGTTACTTAA GATAAACCAG CCGCATTAA
|
Protein sequence | MKSSISAIGT AVPQHKFKQS EAAALISERL QLSPAKKRML RSIYKATGIE SRHSVISDMG HLSNSRSDIS SPDLSTAGRM ALYKEHALPL AISAIKQCMD QSDATFADIT HVITVSCTGM YAPGLDIEIV QQLKLRTNAK RTAINFMGCY GAFNALKVAD DICRANKGAV VLIVSVELCS LHFQNDEDLD HLLSNAIFAD GAAAALIQPM AENQKSLSIE AFNCDLLPQT SEDMAWHIGD SGFDIVLKSY IPEVIESGIA EFMDKLLRQE AITEVNHYAI HPGGMKILQA CETALNITKD KNKHAYHVMR EYGNMSSATI LFVLKELMTH LTVNNHQETI FSCAFGPGLT LESMLLKINQ PH
|
| |