Gene Ping_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0256 
Symbol 
ID4626643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp333141 
End bp334229 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content42% 
IMG OID639795454 
Productnaringenin-chalcone synthase 
Protein accessionYP_941722 
Protein GI119944042 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3424] Predicted naringenin-chalcone synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.524336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA GTATTAGCGC AATTGGAACC GCAGTGCCAC AACACAAATT CAAGCAAAGT 
GAAGCCGCAG CGCTCATTTC AGAACGGCTG CAATTGAGTC CCGCAAAAAA AAGAATGCTT
AGGTCCATTT ATAAAGCGAC GGGTATTGAA TCGCGGCATA GTGTGATCAG CGATATGGGG
CATCTCTCAA ATTCCAGAAG TGACATATCA TCACCTGATT TAAGCACAGC AGGCCGTATG
GCTCTTTATA AAGAGCATGC GCTGCCGTTA GCCATTTCTG CTATCAAGCA ATGTATGGAT
CAATCCGATG CCACATTCGC CGATATCACA CATGTGATTA CAGTCAGTTG TACAGGCATG
TATGCCCCCG GATTAGATAT TGAAATTGTG CAGCAATTAA AGCTGCGCAC CAATGCTAAA
CGCACGGCAA TCAATTTCAT GGGATGTTAT GGCGCCTTCA ACGCGTTGAA AGTGGCAGAT
GATATCTGTC GCGCGAATAA AGGGGCTGTT GTTTTAATTG TGAGTGTTGA ACTTTGCAGT
CTGCATTTTC AAAATGATGA AGATTTGGAT CACTTACTTT CAAATGCGAT TTTTGCAGAT
GGTGCCGCAG CGGCTCTTAT TCAGCCGATG GCAGAGAATC AAAAAAGCCT ATCGATAGAG
GCCTTCAATT GTGATTTATT ACCACAGACC AGCGAAGATA TGGCATGGCA TATAGGAGAT
TCAGGATTTG ATATTGTTTT AAAATCCTAC ATCCCAGAAG TGATTGAGTC AGGGATCGCA
GAGTTTATGG ATAAACTATT GAGACAGGAA GCGATCACCG AAGTTAATCA CTATGCCATT
CATCCAGGCG GTATGAAAAT ACTACAAGCC TGTGAAACGG CCTTGAATAT TACAAAAGAC
AAAAACAAGC ATGCTTATCA TGTGATGCGT GAGTATGGAA ATATGTCATC AGCCACCATT
TTGTTTGTTT TGAAAGAATT GATGACCCAT TTGACGGTTA ATAATCATCA AGAAACTATT
TTTAGTTGCG CTTTTGGACC GGGATTAACC TTAGAATCAA TGTTACTTAA GATAAACCAG
CCGCATTAA
 
Protein sequence
MKSSISAIGT AVPQHKFKQS EAAALISERL QLSPAKKRML RSIYKATGIE SRHSVISDMG 
HLSNSRSDIS SPDLSTAGRM ALYKEHALPL AISAIKQCMD QSDATFADIT HVITVSCTGM
YAPGLDIEIV QQLKLRTNAK RTAINFMGCY GAFNALKVAD DICRANKGAV VLIVSVELCS
LHFQNDEDLD HLLSNAIFAD GAAAALIQPM AENQKSLSIE AFNCDLLPQT SEDMAWHIGD
SGFDIVLKSY IPEVIESGIA EFMDKLLRQE AITEVNHYAI HPGGMKILQA CETALNITKD
KNKHAYHVMR EYGNMSSATI LFVLKELMTH LTVNNHQETI FSCAFGPGLT LESMLLKINQ
PH