Gene Ping_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0253 
Symbol 
ID4625362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp329821 
End bp330783 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content44% 
IMG OID639795451 
Productproline iminopeptidase 
Protein accessionYP_941719 
Protein GI119944039 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01249] proline iminopeptidase, Neisseria-type subfamily 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.381332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.55726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAT TATACCCTGA AATTGAGCCC TTTAATGATT TTCTCTTAGA CGTTGGCTGC 
CAGCACCAGC TGTACGTAGA ACAATGTGGT AACGTTAACG GCCAGCCAGT CATCTTTATT
CACGGTGGGC CCGGTGCAGG TTCCTCCGCT AATGACCGAC GTTTTTTCGA CCCTGAAAAA
TATCATATTA TTTTATTTGA TCAACGAGGT TGTGGACGAT CGACTCCTTA TGGCAGCTTA
GCAGACAATA CTACCGTGCA GTTAGTCGCT GATCTTGAGA AAATACGCAA CCATCTTCAG
CTTGATAAAT GGCATGTATT TGGAGGTTCA TGGGGATCAA CCCTCGCATT GGTCTATGCT
CAGACTCATG CTGAACAGGT GCTCAGTTTG GTGCTCAGAG GAATATTTTT AGGTCGGGTG
CAAGATACTG AGTGGACTTT TGCTGGCGGT GGTGGCTCGC GTATTTTTGC TGATTATTGG
CAAGAATATT TAGCTACCCT GCCCGCAGCT ATACTTAGTC AACATAATCA TGTCAAAGTC
GCTTACGACA TTATGACTGG CAACGACAAA GATGCCGCTG AAAAAGTAGC ACAAGCCTGG
GCTAACTGGG AAATGCGTTG TTGTACCCTA GAGCCCAATG ATGAATTTGT CAGCGCCGCA
ACTTCTGATG ATAGTTGCTG GACGCTAGCA CGCCATGAAG CCCATTACAT GGTCAATAAG
TGCTTCTTAA CGGATAATCA AATTTTGAAA AATTGTGATA AAATAGCCAA TATTCCTACT
GTACTTGTTC ATGGCCGTTA TGACATTGTT TGCCCCTTTG ATAACGCGTG GCTTTTGCAT
CAACAACTGC CTAACTCGCA ATTAGTGATC AGTAAAACCG CAGGTCATGC CTCGGTTGAA
CCTGAAACTA AGCATCACTT ACTCAATGCC ACCAACGCGA TGTTGGAATT ATCACATTAC
TAA
 
Protein sequence
MNELYPEIEP FNDFLLDVGC QHQLYVEQCG NVNGQPVIFI HGGPGAGSSA NDRRFFDPEK 
YHIILFDQRG CGRSTPYGSL ADNTTVQLVA DLEKIRNHLQ LDKWHVFGGS WGSTLALVYA
QTHAEQVLSL VLRGIFLGRV QDTEWTFAGG GGSRIFADYW QEYLATLPAA ILSQHNHVKV
AYDIMTGNDK DAAEKVAQAW ANWEMRCCTL EPNDEFVSAA TSDDSCWTLA RHEAHYMVNK
CFLTDNQILK NCDKIANIPT VLVHGRYDIV CPFDNAWLLH QQLPNSQLVI SKTAGHASVE
PETKHHLLNA TNAMLELSHY