Gene Ping_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0163 
Symbol 
ID4626293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp213919 
End bp214434 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content41% 
IMG OID639795353 
Productshikimate kinase 
Protein accessionYP_941630 
Protein GI119943950 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.919882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAC AACGTAATAT TTTCTTAATT GGCCCAATGG GCGCCGGCAA AAGCACAATT 
GGTCGTCATT TAGCACAAAT GTTACACCTT GATTTTCTTG ATTCTGATGC AGAGATTGAG
AAAAAAACGG GTGCAGACAT TGCGTGGGTT TTTGATGTAG AGGGCGAAGA GGGTTTCCGT
AATCGCGAAC AAAGCATGAT TGATGAGCTG ACACAAAAGC ATGGTATCGT TTTAGCAACA
GGTGGCGGAG CACTTATTCG CCCTGAAAAT AGGATACATT TGTCGGCACG AGGTATTGTT
GTTTACTTAA AAACCAGTGT AAATAAACAG TTAGCCCGGA CATTAAAAGA TAAACGCCGT
CCCTTATTAC AAACAGATGA TCCACGAACG GTATTAGAAG CATTAGCTGA AAAACGTAAT
GAGTTTTATG ATGAAGTAGC TGATTATACG ATGGAAACAG ATGAGCAAAG CGCGAAGGTT
GTCGCTAGTC AAATCATTGC ATTATTGGAT TTCTAA
 
Protein sequence
MAEQRNIFLI GPMGAGKSTI GRHLAQMLHL DFLDSDAEIE KKTGADIAWV FDVEGEEGFR 
NREQSMIDEL TQKHGIVLAT GGGALIRPEN RIHLSARGIV VYLKTSVNKQ LARTLKDKRR
PLLQTDDPRT VLEALAEKRN EFYDEVADYT METDEQSAKV VASQIIALLD F