| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0135 |
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| Symbol | |
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| ID | 4626046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 177167 |
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| End bp | 178141 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639795328 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_941605 |
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| Protein GI | 119943925 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0289854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTC GTAAAAATAT ACTAACGACG GTTATTGGAA CAGCATTATT TATTGGTCTA
TCTGCATCAT CTATAGCTGC GACAACCTTA AAGTTAAGCC ATAATCATAA TCGCGATCAT
GCCGTGCATA AAGCGATGAC CGCAATGGCA ACAGAAGTTA AAGCGGAAAC AAAAGGTGAA
GTGATAATTC GTATTTACCC AGATGCTCAA TTAGGTACGC AGCGTGAATC AATGGAGTTA
TTGCAAAATG GTGCACTTGA TTTAGTAAAA AGTAATGCGG CAGAGCTGGA AGCATTTTCA
TCTGACTACT CAGCATTCAA CTTACCTTAC TTATTCCGTG ACAAACAGCA TTTTTATAAC
GTGCAAGAAG GCGCTGTAGG TGAAGATATT CTGGAAGCTT CTCGGAGTAG TGGTTTTATT
GGTTTGACTT ATTATGATGC AGGAGCTCGA AGCTTTTACG CTGGTAAACC AATTAATAGC
CCTGAAGACT TAAAAGGTCT AAAAGTTCGT GTTCAGCCTA GCCCTTCTGC AATTAACATG
GTGACAGCGC TTGGCGGTAA CCCAACTCCA TTGGCATATG GTGAGTTATA TACTGCACTG
CAACAAGGAG TGGTGGATGC TGCTGAAAAT AACATTCCAT CATTTAGCTT AAGTGGTCAT
GCTGAAGTAT CTAAATTTAT GACCTTAGAT GAGCACACAA TGGTGCCTGA TGTATTGGTT
ATTTCTACTA AAGCATTTGA TGCAATGACA CCAGAAAACC AAAAAATTGT TAAACAAGCA
GCGCTTCACT CATCGCAATT AATGAAAACA CTTTGGGCTG AATCAGAAAC TAAAGAGCGT
ACTAAAGCAG AAAAAATGGG TGTTACATTC ATTAACCCTG ATAAAACACC GTTTATGGAG
GCTGTTCAGC CGATATATCA GCAGTTAACT CCTGAAATAA CCGCGTTAGT TGAGCGAATT
AAAGCAGTTA AGTAA
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| Protein sequence | MNIRKNILTT VIGTALFIGL SASSIAATTL KLSHNHNRDH AVHKAMTAMA TEVKAETKGE
VIIRIYPDAQ LGTQRESMEL LQNGALDLVK SNAAELEAFS SDYSAFNLPY LFRDKQHFYN
VQEGAVGEDI LEASRSSGFI GLTYYDAGAR SFYAGKPINS PEDLKGLKVR VQPSPSAINM
VTALGGNPTP LAYGELYTAL QQGVVDAAEN NIPSFSLSGH AEVSKFMTLD EHTMVPDVLV
ISTKAFDAMT PENQKIVKQA ALHSSQLMKT LWAESETKER TKAEKMGVTF INPDKTPFME
AVQPIYQQLT PEITALVERI KAVK
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