| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0119 |
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| Symbol | nudE |
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| ID | 4626188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 157390 |
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| End bp | 157947 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639795315 |
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| Product | ADP-ribose diphosphatase NudE |
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| Protein accession | YP_941592 |
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| Protein GI | 119943912 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00596251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.391787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCAAT CATCACCAAC ATTACCTCAA ATACTCAAGC GCAGTCTAGT TGCGAGTAGT
CGATTTTTTA AAATTGAAGC GCTGCAACTG AAATTTAGTA ATGGTCAGCA ACGAGAATTT
GAACGTATGC AGGGTTACCA TAAGGGCGCT GTACTGATTG TTCCATTTTA CGATCCTCAA
ACTCTTCTAC TTATAAGAGA ATATGCTGCG GGCACACATT CCTATGAAAT AGGTTTTCCA
AAAGGGCTTA TCGATTCTGG TGAAACTGCT GAACAAGCAG CGAATAGAGA ATTAAAGGAG
GAAATAGGTT TTGGGGCTAA AAGGTTACAA AAACTTAAAA CAGTAACCAT GGCACCCAGT
TATTTCAGCA GTGAGATGAC CCTGTTTATG GCATTTGATC TTTACCCCGA AAAGCTCGAG
GGTGACGAAC CAGAGCCGTT AGAAGTAATA AAATGGCCAT TAAATAAAGT AGATGAATTA
TTAGCCAGGG ATGATTTTCA GGAGGCGCGA GGAATATCTG CGTTATTATT GACCTTAAAA
GCGCTTAACG AAGCCTGA
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| Protein sequence | MSQSSPTLPQ ILKRSLVASS RFFKIEALQL KFSNGQQREF ERMQGYHKGA VLIVPFYDPQ
TLLLIREYAA GTHSYEIGFP KGLIDSGETA EQAANRELKE EIGFGAKRLQ KLKTVTMAPS
YFSSEMTLFM AFDLYPEKLE GDEPEPLEVI KWPLNKVDEL LARDDFQEAR GISALLLTLK
ALNEA
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