Gene Ping_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0115 
Symbol 
ID4626184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp153210 
End bp154310 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content40% 
IMG OID639795311 
ProductMOSC domain-containing protein 
Protein accessionYP_941588 
Protein GI119943908 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0633] Ferredoxin
[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID[TIGR02008] ferredoxin [2Fe-2S] 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.84635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAACAC TTACAGATAT TTATATTTAT CCCATTAAAT CAGTCAAAGC GATTAACCAA 
CCTGCTGCAA AAGTTGAAAA AGCAGGTTTA AAGTTTGATC GTCGTTATAT GTTGATTGAT
CAACAAGGGC AATTTATTAC CGGTCGAAGT TACCCGCAAC TCACCCAAAT AGAGGTGCAG
TTTTCAAAAA AAACGTTAAT AGTCAACGCC CCCAATATGC CATCATTAAC CATTAATCCT
GCGCACTTTG GCCAGCAAAC TAAAAATGCA CAGCTGTGGT CTGATAATGT TAACGCACTG
CATTGTCATG AGGATTACGA CCAATGGTTT TCAGCCTTTT TGCAAAAAAA ATGCCAGCTG
GTCTTTTTTG CAGAAGAAAC TCAGCGCTTG GTCAAAAATA CTAACGCACC GGTTTCATTT
GCCGATGGTT ACCCGTTATT ATTGATTAAT CAAACATCCG TAGAGCAACT TAATGCGCGC
TTAACAACGC CGGTAACCGC ATTACATTTT CGTCCTAATA TTGTTGTCAA AGGTGATTTC
CCTTTTGTTG AAGACAGCTG GTCCCGCATT AAGATTGGAG AAGTCGAATT TGAAGTCAGT
AAACCTTGCT CACGTTGTAT ATTTATTAAT GTGGATCCTA AAACCGGCAT TGCTGACCAA
AGTGAACCTT TACTAACATT ATCCAAATTT CGTTATTCCC ATGGAAATAT CGATTTTGGG
CAAAATTTGA TTCCTCTTAA TGAAGGTTTG ATTCGAGCAG GTGACGAGGT ACAAGTGATC
ATTGCCCAGG GGGCCCGATT TTATAGCGCT CAGGACGATC AACAGGAAAA TAATAAAGAA
ACCTTAGCAA TACATTATCA AGGCTCAAAC GTAACCACTC AGGGGGATAA TCAACAACTA
TTATTAGATC AAGCGGAACA AGCAGGCATC GATATCCCGT ACTCCTGCCG GGGTGGGCAA
TGTGGTAGCT GCAAGGTTAA ATTAATCGAA GGTGAAGTGC AGGTGCTTAA TGATGAAGGA
TTAAGTGAAG AAGAAATTGA GCAGGGGTAT ATTCTTGCCT GCAGTTGTAT CCCCACCTCA
GATATTAGTA TCAACCATTA A
 
Protein sequence
MQTLTDIYIY PIKSVKAINQ PAAKVEKAGL KFDRRYMLID QQGQFITGRS YPQLTQIEVQ 
FSKKTLIVNA PNMPSLTINP AHFGQQTKNA QLWSDNVNAL HCHEDYDQWF SAFLQKKCQL
VFFAEETQRL VKNTNAPVSF ADGYPLLLIN QTSVEQLNAR LTTPVTALHF RPNIVVKGDF
PFVEDSWSRI KIGEVEFEVS KPCSRCIFIN VDPKTGIADQ SEPLLTLSKF RYSHGNIDFG
QNLIPLNEGL IRAGDEVQVI IAQGARFYSA QDDQQENNKE TLAIHYQGSN VTTQGDNQQL
LLDQAEQAGI DIPYSCRGGQ CGSCKVKLIE GEVQVLNDEG LSEEEIEQGY ILACSCIPTS
DISINH