| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0110 |
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| Symbol | |
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| ID | 4626179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 141500 |
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| End bp | 142909 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639795306 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_941583 |
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| Protein GI | 119943903 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.372068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTATG CAAAGCGCTC ACTGTGTTTA CAATTGAGTA TTTTTATCAT GATAAAATCC
CCCCTTTTCA ATTTAACTAT CCACCAGAAA ATATTCGCAA TTGCATTTCC GATGATGATT
TCAAATATTA GCGTGCCATT ACTTGGCCTT GTTGATACGG CCGTGATTGG GCATATGCCG
GAATCATACT ACTTAGCGGG AGTCGCAGTA GGCTCGATGA TTGTGACGCT TATTTTCTGG
ATGCTGGGTT TTTTAAGAAT GTCGACCACC GGATTAGTCG CACAGGCTTA TGGAGCGGGT
GATCATCAGC AAATTATTCG CTTGTTGTTA CAAGCTATTC TAGTCGCTTT GTTGTTAGCT
ATTGCCATTT TACTCTTACA AAAACCTTTG ATTATATTGG CCTTAAAATT TATTGAGGGT
AGTGAGCAAG TTCTTTTTTA TGCACAGTTA TATTTTAATA TCCGTATTTG GAGCGCGCCA
GCAGCTTTGA TTAATATGGC GTTATTAGGT TGGTTACTGG GTATGCAAAA TGCCAAAGTA
CCTATGTTTT TACTGATTAT TAGCAATGCC ATCAATATTG GTTTAGACGT ATTATTTGTG
GTGTTTTTGG ATTGGGGAGT TGCAGGAGTG GCCTGGGCAT CTCTATTCGC TGATTATATT
TCTTTATTGT GCGGTTTATT ACTTGTTAAA AATCACATTA AGCCTTTTTA TAAACAGGGA
GATTTACTTA AATTAAGTAA ACAACTTAGC GATTTAAATT CTCTTAAAAA ATTTATTTTA
TTGAACCGTG ATATATTTAT TCGCACTTTA TGTATACAAG TCACCTTTGC GTTTATGACG
ATTCAGGGGG TTAAATTGGG AGATGCTGTT GTTTCTGCAA ATTTAGTGTT GATGCATTTT
CTATTACTTA TCTCTTTTTC TATGGATGGT CTTGCTTATG CAGCCGAAGC ACTTGTCGGG
AAAAGTATCG GTACACGTTG TTTAATAAAA TTAAAAGAAA GTGTTTATGT CACTTTATTT
TGGTCGGTTA TTTTTAGCTT ATTGCAGCTC CTGTTATTTT ACGTTTATGG GCAGTGGATT
ATTGCGCAGA TAACATCGAT TGAAAGTGTG CAAAAAGAGG CGCTCAGCTA TTTGCCCTGG
TTAGTTATTA TTCCGATAAC ATCAGTATTA GGTTTTATTT TTGATGGGAT TTTTATCGGT
ATGACACGTG CCAAGGAGAT GCGTAATAGT CTTATTTTTT CTCTTTTGCT GGTCTATTTC
CCCGTTTGGT TTCTATTTTC AGAACAGGGT AACCACGCCT TGTGGATAGC AATGAATGCT
TTTATGCTTG CCCGCGGATT AAGCCTTGCA TGGATTTATA GGCAACTTAG TAAAAAAGAC
CAACTAATAC CAAAAGAACT AAAAAGGTGA
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| Protein sequence | MSYAKRSLCL QLSIFIMIKS PLFNLTIHQK IFAIAFPMMI SNISVPLLGL VDTAVIGHMP
ESYYLAGVAV GSMIVTLIFW MLGFLRMSTT GLVAQAYGAG DHQQIIRLLL QAILVALLLA
IAILLLQKPL IILALKFIEG SEQVLFYAQL YFNIRIWSAP AALINMALLG WLLGMQNAKV
PMFLLIISNA INIGLDVLFV VFLDWGVAGV AWASLFADYI SLLCGLLLVK NHIKPFYKQG
DLLKLSKQLS DLNSLKKFIL LNRDIFIRTL CIQVTFAFMT IQGVKLGDAV VSANLVLMHF
LLLISFSMDG LAYAAEALVG KSIGTRCLIK LKESVYVTLF WSVIFSLLQL LLFYVYGQWI
IAQITSIESV QKEALSYLPW LVIIPITSVL GFIFDGIFIG MTRAKEMRNS LIFSLLLVYF
PVWFLFSEQG NHALWIAMNA FMLARGLSLA WIYRQLSKKD QLIPKELKR
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