Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0109 |
Symbol | |
ID | 4626178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 140766 |
End bp | 141404 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639795305 |
Product | electron transport protein SCO1/SenC |
Protein accession | YP_941582 |
Protein GI | 119943902 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.157437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TATTACTCTT TATAATGCCG TTCTTTCTGT TGTTCTTTCT ATTATTAGGA CGAGCACAGT TTAAAAATGA CTTAACTCAG AATGAATCTT TAATTTTATT TAAAGAAGGT AAAAGTTTAA TCGATTTTTC CTTTGATGTG GCAGGAGGTG AACATTTTAC TAATCAAGAT TTACAAGGAA AATGGACACT TTTCTTTATT GGTTACACTT TTTGTCCTGA TATCTGTCCA ACGACCTTAG CGCATCTTGA TAGTGTTTAC CCAAAATTAA CAGCACAACC CTATGACGAT ATACAAATTG TATTTGTCTC GGTTGATCCA AACCGTGATA AAGCCGAGGA ATTAGCGGAA TATGTACATT ACTTTAATTC CGAATTTATA GGTGTGACGA GTACGCACAA ACAGCTATGG CCTGTTGTAC AAAATTTAGG GTTGATTTAC AGCATTGTGG ACCAGGGAGT GGGAGATCCC TATTATTTGG TGGATCACAG TGCTTCAATT GTATTAATTA ATCCCAAAGG TGAGCATCAC GCCTCTTTTC AAGCGACAAT AAATGCAGAA GGCATCTTCA GTGTGAAGAT GGACTTAATG GTAGAAAACA TCCATCAAAT GTATAAAAAC TGGCATTAA
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Protein sequence | MKKILLFIMP FFLLFFLLLG RAQFKNDLTQ NESLILFKEG KSLIDFSFDV AGGEHFTNQD LQGKWTLFFI GYTFCPDICP TTLAHLDSVY PKLTAQPYDD IQIVFVSVDP NRDKAEELAE YVHYFNSEFI GVTSTHKQLW PVVQNLGLIY SIVDQGVGDP YYLVDHSASI VLINPKGEHH ASFQATINAE GIFSVKMDLM VENIHQMYKN WH
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