Gene Ping_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0109 
Symbol 
ID4626178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp140766 
End bp141404 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content35% 
IMG OID639795305 
Productelectron transport protein SCO1/SenC 
Protein accessionYP_941582 
Protein GI119943902 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.157437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TATTACTCTT TATAATGCCG TTCTTTCTGT TGTTCTTTCT ATTATTAGGA 
CGAGCACAGT TTAAAAATGA CTTAACTCAG AATGAATCTT TAATTTTATT TAAAGAAGGT
AAAAGTTTAA TCGATTTTTC CTTTGATGTG GCAGGAGGTG AACATTTTAC TAATCAAGAT
TTACAAGGAA AATGGACACT TTTCTTTATT GGTTACACTT TTTGTCCTGA TATCTGTCCA
ACGACCTTAG CGCATCTTGA TAGTGTTTAC CCAAAATTAA CAGCACAACC CTATGACGAT
ATACAAATTG TATTTGTCTC GGTTGATCCA AACCGTGATA AAGCCGAGGA ATTAGCGGAA
TATGTACATT ACTTTAATTC CGAATTTATA GGTGTGACGA GTACGCACAA ACAGCTATGG
CCTGTTGTAC AAAATTTAGG GTTGATTTAC AGCATTGTGG ACCAGGGAGT GGGAGATCCC
TATTATTTGG TGGATCACAG TGCTTCAATT GTATTAATTA ATCCCAAAGG TGAGCATCAC
GCCTCTTTTC AAGCGACAAT AAATGCAGAA GGCATCTTCA GTGTGAAGAT GGACTTAATG
GTAGAAAACA TCCATCAAAT GTATAAAAAC TGGCATTAA
 
Protein sequence
MKKILLFIMP FFLLFFLLLG RAQFKNDLTQ NESLILFKEG KSLIDFSFDV AGGEHFTNQD 
LQGKWTLFFI GYTFCPDICP TTLAHLDSVY PKLTAQPYDD IQIVFVSVDP NRDKAEELAE
YVHYFNSEFI GVTSTHKQLW PVVQNLGLIY SIVDQGVGDP YYLVDHSASI VLINPKGEHH
ASFQATINAE GIFSVKMDLM VENIHQMYKN WH