| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0104 |
|---|
| Symbol | |
|---|
| ID | 4625027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 136263 |
|---|
| End bp | 137246 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639795300 |
|---|
| Product | general secretion pathway protein K |
|---|
| Protein accession | YP_941577 |
|---|
| Protein GI | 119943897 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3156] Type II secretory pathway, component PulK |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCGT CGTATAACAA AAAGCAACGT GGTGTTGCAT TAATTACAGT ATTAATGATT
TTAGCCATTA TGGTAACCGT TGCCGCAACA ATGACCGGTC GGTTGACCAT GAGTTTAAAA
CGCACCGAGG GGTTAATTTT TTCACAAAAA GTATATTGGT ATGGTCAGGC GTCCGCGGAG
CTTGGGAAAA AGATTTTAGA TCAAAATTTT TCAGATAGCA GAGTGGTTAG TTTGGATCAA
CTGTGGGCAA TCCCAAACAT GGTTTTTCCT CTGGAAAACG GCAACATCGG AGGAAGAATG
AGGGATTTAC GCAGCTGTTT TAATGTCAAT GCCCTGCAGT CGCCGGATAA GGAAGGTACC
CCAGCTATCC CTTTGCGGCA ATTCCAAAAC TTACTGGCGG CGCTGGGTGT GAGTGAATAT
GGTGCGCAGA TGATTGCCGA ATCTACACGG GACTGGATTG ACGAAGATGA CAGCAACGAC
GCAGCTCTGG GGGCTGAAGA TAGTTTTTAT CAGGCAAAGA GGGTTCCACA TTTAACGGCG
GATAATTTAA TGACCGATAT CAGTGAGCTG CGCAGTATTC AGGGTGTTGG ACCAAAAACA
TACGAAAAAA TAGTGCCTTA TTTGTGTGCC GTTCCAAGCC GTGTGCAGAA AATAAACGTT
AATACGGTGG ATATTGAACA AGCAGAAATA CTCTATGCTT TATTTAAAGA TGAGCTCAAT
ATCAGTATTG ATAATCTGCA AAATTTGCTT CAGAACAGAC CGATAAGTGG CTGGGCAAAT
GTTGATGAAT TTCTGGCTAT GCCTCTCTTT CAGGGAGTGT CAATTTCGGC ACCGCTAAAA
ACGCAATTAA GTGTTACCAG TGACTTTTTT CAATTAAGGG GCATTACAGA GTTTGCCGAT
CGACTACTTG CAATTGATCT GACCTTTCAG ATCAAAGCAC AACAAGCCAA GGTAATCCGC
TATCAATCAG GCGGTCTTAA ATGA
|
|---|
| Protein sequence | MASSYNKKQR GVALITVLMI LAIMVTVAAT MTGRLTMSLK RTEGLIFSQK VYWYGQASAE
LGKKILDQNF SDSRVVSLDQ LWAIPNMVFP LENGNIGGRM RDLRSCFNVN ALQSPDKEGT
PAIPLRQFQN LLAALGVSEY GAQMIAESTR DWIDEDDSND AALGAEDSFY QAKRVPHLTA
DNLMTDISEL RSIQGVGPKT YEKIVPYLCA VPSRVQKINV NTVDIEQAEI LYALFKDELN
ISIDNLQNLL QNRPISGWAN VDEFLAMPLF QGVSISAPLK TQLSVTSDFF QLRGITEFAD
RLLAIDLTFQ IKAQQAKVIR YQSGGLK
|
|---|
| |