Gene Ping_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0100 
Symbol 
ID4625023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp134210 
End bp134644 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content43% 
IMG OID639795296 
Productgeneral secretion pathway protein G 
Protein accessionYP_941573 
Protein GI119943893 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAGAA ACAAAAATCA ACAAAAAGGT TTTACCTTAC TTGAAATTAT GGTGGTTATT 
GTCATTTTAG GAATATTAGC CTCCCTAGTA GTACCTAATT TGATGGGTAA TAAGGACAAA
GCCGATCGTC AAAAAGTGGT GTCGGATCTG GTTGCATTAG AAAATGCTTT AGATATGTAT
CGCTTAGATA ACAGTTATTA TCCCACTACA GATCAAGGAT TAGATGCCTT GGTTGAAAAG
CCGAGCGGCA CACCCGCACC GCGTAATTAT CGAGAAGAGG GTTACATCAG ACGCCTTCCT
CAGGATCCAT GGGGCAATGA TTATATACTG GTGAGCCCGG GAGAGCAGGG TAGAATTGAT
GTTTTTTCTG TTGGCCGCGA TGGCGAGGAA GGCACCGATG ATGATATAGG TAACTGGAAC
CTGGATGGGA AATAA
 
Protein sequence
MKRNKNQQKG FTLLEIMVVI VILGILASLV VPNLMGNKDK ADRQKVVSDL VALENALDMY 
RLDNSYYPTT DQGLDALVEK PSGTPAPRNY REEGYIRRLP QDPWGNDYIL VSPGEQGRID
VFSVGRDGEE GTDDDIGNWN LDGK