Gene Ping_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0098 
Symbol 
ID4625021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp131375 
End bp132910 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content42% 
IMG OID639795294 
Productgeneral secretory pathway protein E 
Protein accessionYP_941571 
Protein GI119943891 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID[TIGR02533] general secretory pathway protein E 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGC CTGAGCAAGA TACTTTGCAG GTGGTGGCGG CGCTCAATGA AGCTGAGCTT 
ATTGAAGTCA CGCCGGGTGG TCAGTTACCT TTCCCATTTT CAAAAAAACA TGAGTTAGTG
ATTTTTTACG AAAATGAGAA TGCACAGCTT TGTTACAAGA AAGCCCCGAG TGCTGATTTG
ATACTTGAAG TGCGTCGTGC GATCGGTTGT GAATTTACTT TAAAACAGGT AGATAATGTC
CTTTTCGAGC AGTTAGTAAC AACGGCTTAT CAAACTTCTT CTTCTCAAGC ACAACAATTG
ATGGAAGATA TTGGCAGTGA TGATCTTTTT ACTCTGGTAG ATGAATTGCC TCTGGATGAG
GATTTATTAG AAACACAAGA TGATGCCCCG ATTATTAAAT TAATTAATGC TATGTTGGGT
GAGGCTATTA AAGAAGAAGC TTCCGATATT CATATCGAAA CCTTTGAAAA TAGTTTAGTT
ATTCGCTTCC GTATTGATGG TTTATTACGA GAAATTCTTA AACCACAACG TAAGTTGTCT
AACTTATTGG TTTCTCGTAT TAAAGTAATG GCGAAGTTAG ATATTGCTGA AAAGCGGGTG
CCACAGGATG GCCGTATTTC CGTACGTATT GGTGGTCGGG CGGTTGATGT GCGTGTTTCA
ACTATGCCTT CAAGTCATGG TGAGCGAGTT GTACTGCGTT TATTGGATAA GAATGTCATT
AAATTAGACC TTGCAACCTT AGGTATGACA GAAGAAAATC ACCAACTGGT GCGCGACCTT
ATTCATAAAC CCCATGGCAT TATTTTGGTC ACAGGACCAA CAGGTTCAGG TAAAAGTACG
ACCTTGTATG CCAGTTTATT AGAGATAAAC TCGAAAGATC GTAATATCCT CACGGTTGAA
GATCCTATTG AGTATGCCAT TGATGGTGTC GGACAAACTC AGGTAAATAC CAAAGTGGAC
ATGACTTTTG CGCGGGGATT ACGGGCAATT TTACGTCAGG ATCCCGATGT TGTTATGATT
GGTGAGATTC GTGATTTAGA AACCGCGCAG ATTGCCGTAC AAGCCAGTTT AACCGGACAT
CTGGTTTTAT CAACCCTGCA CACTAACAGT GCTGTGGGTG CGGTGACTCG TTTGCATGAT
ATGGGAGTTG AGCCGTTTCT GTTATCTTCC AGTTTATTAG GGGTTTTAGC GCAACGATTA
GTCAGGCGTT TATGCCCTGA ATGTAGACAA ACGCACACCA CAACAGCACA AGAAAAGCAG
ATTTTAGGTT TGCAGGAAAA AGATAATGCG CGTATCTATA AAGCCAAAGG TTGCTCTCAA
TGCAATCAAA CCGGCTATAG AGGGCGTACC GGTATCCATG AGTTATTAAT CGTTGATGAG
CAGGTTCGCG AATTAATTCA TTCCGGAGCA GGAGAGCAGG CGGTCGAAAA ATTAATTCGT
CAGCGTACGC CCAGTATTCG CGATGATGGT CTAGCTAAAG TGTTAGCAGG AGTAACCACA
TTGGAAGAGG TTCTACGTGT AAGCAGAGAG GATTAA
 
Protein sequence
MITPEQDTLQ VVAALNEAEL IEVTPGGQLP FPFSKKHELV IFYENENAQL CYKKAPSADL 
ILEVRRAIGC EFTLKQVDNV LFEQLVTTAY QTSSSQAQQL MEDIGSDDLF TLVDELPLDE
DLLETQDDAP IIKLINAMLG EAIKEEASDI HIETFENSLV IRFRIDGLLR EILKPQRKLS
NLLVSRIKVM AKLDIAEKRV PQDGRISVRI GGRAVDVRVS TMPSSHGERV VLRLLDKNVI
KLDLATLGMT EENHQLVRDL IHKPHGIILV TGPTGSGKST TLYASLLEIN SKDRNILTVE
DPIEYAIDGV GQTQVNTKVD MTFARGLRAI LRQDPDVVMI GEIRDLETAQ IAVQASLTGH
LVLSTLHTNS AVGAVTRLHD MGVEPFLLSS SLLGVLAQRL VRRLCPECRQ THTTTAQEKQ
ILGLQEKDNA RIYKAKGCSQ CNQTGYRGRT GIHELLIVDE QVRELIHSGA GEQAVEKLIR
QRTPSIRDDG LAKVLAGVTT LEEVLRVSRE D