Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0096 |
Symbol | |
ID | 4625019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 128460 |
End bp | 129293 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639795292 |
Product | general secretion pathway protein C |
Protein accession | YP_941569 |
Protein GI | 119943889 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3031] Type II secretory pathway, component PulC |
TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.140441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGTTAT CTATTTTTTT ACAAAAACTG CCAAACATAG TACTGCTCTT GTTAGTTGCT TTGTTAGCAT ACCAACTTGC CTTGTTTACC TGGTCGTTAT TGCCTGTTGA AAAATCTGCA GGGCAGTGGG CTATGCCCGA AATAACCGGG CTAAATAGTG CTAATAATAT TGATAGTGAC AAGCTCAAAG GCCTGCAGCT TTTTGGGAAA ACTGTCGCAC CTGCTGCTAA GCCTAAAAAG CGATTGTTGC CCGAGACAAT GAGTGCAACA AAACTGAATT TAACGTTGGC TGGTGTGGTT GCTGCCTCTG ACCCGTTATA TTCGAGTGCA ATTATTGCCA ATAATGGAAG GCAGGACAGT TATTTTATTA ACTCTAAGAT CGAAGGCACA AGTGCTTTCG TTTATGAAAT TTATGAGGAT CATATCGTTC TTGATGAAAA TGGTACTTAT CAGATCTTAA TGTTGGATGG ATTTGATACG GCTAATAATA GATCCTCCAA AGAAACGCCG ACTCAAGCCC CAATGAAAGA AATCGCTTTA GACCGTAGCG AAATATTAAA AGATCCGAGT AAGTTAACTA ACTACATTAA TATTTCGCCC GTGCGAGAGG GAAGTGAAAT TAAAGGTTAC CGCCTCACTC CCGGTCGTGA TCCGGCCTTA TTTGAACAGG CCGGTTTAGA AAATGGAGAT TTGGTCGTCG AGTTAAATGG CGTTGATCTC ACGAATATGG CAGAGTCGAT GTCTTTAATG CAAGAGTTCC CAACAATGAC CGAGATTAGC TTAACAGTTG ACCGCGAAGG TCAGTTATAT GAGCTGTATT TTAGTATTCC ATAG
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Protein sequence | MPLSIFLQKL PNIVLLLLVA LLAYQLALFT WSLLPVEKSA GQWAMPEITG LNSANNIDSD KLKGLQLFGK TVAPAAKPKK RLLPETMSAT KLNLTLAGVV AASDPLYSSA IIANNGRQDS YFINSKIEGT SAFVYEIYED HIVLDENGTY QILMLDGFDT ANNRSSKETP TQAPMKEIAL DRSEILKDPS KLTNYINISP VREGSEIKGY RLTPGRDPAL FEQAGLENGD LVVELNGVDL TNMAESMSLM QEFPTMTEIS LTVDREGQLY ELYFSIP
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