| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0088 |
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| Symbol | |
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| ID | 4625011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 118212 |
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| End bp | 120098 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639795284 |
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| Product | PTS system, mannitol-specific IIABC protein |
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| Protein accession | YP_941561 |
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| Protein GI | 119943881 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2213] Phosphotransferase system, mannitol-specific IIBC component
[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
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| TIGRFAM ID | [TIGR00851] PTS system, mannitol-specific IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.15272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCAT CACAATCCAA GATTAAAGTA CAAAACTTTG GTCGCTTATT GTCAAATATG
GTTATGCCAA ATATTGGCGC CTTTATCGCA TGGGGTTTAA TTACCGCATT ATTTATTCCA
ACGGGGTGGA TACCTAACGA AACATTAGCC ACCATGGTTG GGCCGATGAT CAAATATATG
CTGCCGCTCT TAATTGGTTA TACCGGTGGT AAAATTATAG CCGGAGAGCG TGGTGCCGTT
GTAGGTGCAA TAGCGACAAT GGGTGTGATT GTTGGTACAG ATATTCCAAT GTTTATGGGT
GCGATGATTG TTGGTCCGTT AGGCGGCCTG GCAATTAAGA AATTTGATGC TGCCATTCAC
GGTAAAGTGA AAAGCGGTTT TGAAATGTTG GTTAACAACT TTTCATCCGG TATTATTGGT
ATGGTGCTAG CGATTATTGC TTACGTAGTG ATTGGTCCTG CTGTTAAAAT GTTATCGACA
GCCCTTGCTG CTGGTGTTGA TGTTTTAGTG GTCAATAACC TGCTTCCTTT GACTTCTATT
TTTGTTGAAC CGGCAAAGAT TTTGTTCCTT AATAATGCGA TTAACCATGG TATTTTTACG
CCGCTGGGTA TTGCGCAGTC AGAGTCTCTT GGTCAATCTG TTTTCTTCTT AATTGAAGCA
AACCCAGGTC CAGGTTTAGG TCTTCTTTTA GCCTACATGG TGTTCGGTAA AGGTTCTGCA
AAAGAAACAG CTCCTGGTGC CGTCATTATC CACTTCTTTG GTGGTATCCA TGAAATTTAC
TTCCCTTATG TATTGATGAA TCCGCGTCTT ATCCTATCTG TTATTGCAGG TGGTATGACA
GGCGTATTCG TTCTTACTCT ATTCGATGCC GGTCTTATCT CTCCTGCATC TCCTGGTTCT
ATCTTTGCTG TTTTAGCCAT GACGCCTAAA GGCGCATATA TGGGTATTCT TCTATCTGTT
GCTGCTGCTG CCGCTGTTTC TTTTGTTGTG GCATCTATTC TGATGAAAAC ACAAAAAACG
GTTGCCGGTG ATGAAGTTGC ACTGGAAGAA GCTGCAAACC AAATGCGCGA CATGAAGCAA
AGCGCTAAAG GTCAAGCAAC AGGAAATGAC CGCGTTGATA TGTCTGCCGT TAAAAAAATC
ATTGTTGCTT GTGATGCAGG TATGGGTTCA AGTGCAATGG GCGCAAGTCT ATTACGCAAA
AAAGTGCAAG CTGCAAATTT AAATATTGAA GTGATTAATA CTGCGATCAA TGATTTACCC
GGTGATGTTG ATATTGTTGT TACTCATAAA GATTTAACCG ACAGAGCACG TAAGCATGCG
CCCAATGCAC AGCATATTTC ATTAACTAAT TTCTTAGATA ATGCGATGTA TGACAATTTG
GTGAAAGATC TTAAATCTGC CGGTAATGCA CCTGCTGCAA ATGCACCAGA AGGTGATGCA
AAAAAGTCTG AAGGTCCTTT GAAATTAACC GATAAAAATA TCTTCTTAGG GCTTAAACCT
GCAACCAAGG AAGAGGCGAT TAAATTTGCT GGTGAGCAGT TGATTGCTTT GAATTATGTT
GAGCCTGAAT ATCTACAGGG TATGTTTGAT AGAGAAAAAT TAGTATCAAC TTATTTAGGT
GAATCGATAG CGGTTCCTCA CGGTACTATT GAGACAAAAA AACATGTTCT TAAAACCGGT
ATCGTATTTT GTCAGTACCC GGCAGGTATT CAGTGGGGTG AAGATGAAGA CGATGTTGCA
ATTCTGGTTA TTGGTATTGC AGCGCAGGGT GATCAACATA TTCATGTGAT CACCGCCATC
ACCAATGCAC TTGATGATGA AGAAGCAATA GAATGTTTAA AAACAACAGT TAATAAAGAA
GATGTACTGA AAATTTTAAA TAACTAG
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| Protein sequence | MLSSQSKIKV QNFGRLLSNM VMPNIGAFIA WGLITALFIP TGWIPNETLA TMVGPMIKYM
LPLLIGYTGG KIIAGERGAV VGAIATMGVI VGTDIPMFMG AMIVGPLGGL AIKKFDAAIH
GKVKSGFEML VNNFSSGIIG MVLAIIAYVV IGPAVKMLST ALAAGVDVLV VNNLLPLTSI
FVEPAKILFL NNAINHGIFT PLGIAQSESL GQSVFFLIEA NPGPGLGLLL AYMVFGKGSA
KETAPGAVII HFFGGIHEIY FPYVLMNPRL ILSVIAGGMT GVFVLTLFDA GLISPASPGS
IFAVLAMTPK GAYMGILLSV AAAAAVSFVV ASILMKTQKT VAGDEVALEE AANQMRDMKQ
SAKGQATGND RVDMSAVKKI IVACDAGMGS SAMGASLLRK KVQAANLNIE VINTAINDLP
GDVDIVVTHK DLTDRARKHA PNAQHISLTN FLDNAMYDNL VKDLKSAGNA PAANAPEGDA
KKSEGPLKLT DKNIFLGLKP ATKEEAIKFA GEQLIALNYV EPEYLQGMFD REKLVSTYLG
ESIAVPHGTI ETKKHVLKTG IVFCQYPAGI QWGEDEDDVA ILVIGIAAQG DQHIHVITAI
TNALDDEEAI ECLKTTVNKE DVLKILNN
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