| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0087 |
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| Symbol | |
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| ID | 4625010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 116597 |
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| End bp | 117577 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639795283 |
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| Product | transcriptional regulator |
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| Protein accession | YP_941560 |
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| Protein GI | 119943880 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.284033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAG TAAAGACTAC TTCCACCACA CCCGGTATTG ACGATCATGA AATGTTGACC
GAGATTGCTA TCCTCTATTA TCAGGAAGGT GCGACTCAAG CAGAGATATC AAAAAAGTTT
TCTATCTCTA GAATTAAAAT TGGACGCCTG CTGCGTAGAG CACGAGAAGA GGGGGTTGTT
GAGATTAATG TACGTTACCA TCCCATCTAT ACGGCCCAAC TTGAGAAACG CTTAATCAAG
AAATTCAATC TCAAACGTGT CCTTATTGCG CTGGATCAAG CGAATAACGA AGAGCAGCGC
AAACAGGTCG CGGGGCTTGT CTCAGCCTTT CTCGCTATCA ACCTGCAGGA CGATAGTACG
GTCGCGGTTG GCCAAGGCCA AAATGTCGCG GCCGTTGCCG ATCATGTAGG CCTGGTGACA
CAACGCAAGG CACGATTTGT TTGTGCTATT GGTGGTACTC ATCGCAGTGG GGATAGCATT
AATGCAGACC ATATCTGTCG TCAACTTGCT AAAAAATTTG GCGGTACCAG TGAAACCTTG
TATGCACCTG CCTATGTTGA TAATCCCGAG ACTCGCAACG CTTTTATTGC TCATAACACG
GTTTCTGAAA CATTAAAACA AGCTAGAAAT GCAGATTATG CTCTGGTGGG TGTCGGTGAT
ATGAATAAAA ATAGTCATAT GATTAAACTC GGATGGTTTA CCAAGCAAGA GTTTGCAGAG
GCGCGCATCA ATGAAGGTAT CATTGGTGAT ATTGGTGGTT TTGATTTCTT TAAATCTAAT
GGCCAAAGAG CGAACACCCG GTTAAGAGAT CGGGTGATTG GTCTGGGCAC CGAGGATTTA
CGCCGTATTC CAAATGTAAT TGCCATTGCC AGCGAAGAAA GAAAATCCTT AGCTCTGGCA
GGTGCACTGC GTACCGGCAG TATAGATATC TTAGCCACTA GCGTAAGTTG TGCAATGACG
TTATTAAATA TGGAAGATTA A
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| Protein sequence | MSQVKTTSTT PGIDDHEMLT EIAILYYQEG ATQAEISKKF SISRIKIGRL LRRAREEGVV
EINVRYHPIY TAQLEKRLIK KFNLKRVLIA LDQANNEEQR KQVAGLVSAF LAINLQDDST
VAVGQGQNVA AVADHVGLVT QRKARFVCAI GGTHRSGDSI NADHICRQLA KKFGGTSETL
YAPAYVDNPE TRNAFIAHNT VSETLKQARN ADYALVGVGD MNKNSHMIKL GWFTKQEFAE
ARINEGIIGD IGGFDFFKSN GQRANTRLRD RVIGLGTEDL RRIPNVIAIA SEERKSLALA
GALRTGSIDI LATSVSCAMT LLNMED
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