Gene Ping_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0066 
Symbol 
ID4624463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp88695 
End bp89228 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content37% 
IMG OID639795258 
Productanti sigma-E protein, RseA 
Protein accessionYP_941539 
Protein GI119943859 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00955502 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.708681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATG TGAATGAACA ACTGTCAGCG ATTGTTGATA ATGAATTTAT TGATGAGAAG 
TTAATTGATG AACTACTGAT TAATAAAGAT AAACAGGAGC TATTTTCTCG TTATCATTTA
ATTGGTGATG TGATGCGTGG AGATATTACG GATCAATTCA TTAATTTTGA TATTAGTCAG
CAAGTAATGG CTAAGATAGA ACAGCCCACT AAAATAGCTG CTGTTGTGGA GCTTGATACT
CCCACAGAAA AAAGTAAAAA TAATGTTATC TCTTTTGTTA AACGTTTTGG ACAATACGCG
ATCGCCGCAT CTGTTGCAGG GGTAGTGGTG TTAGCAAGCC TTGTTACTTC TGAACCAACC
TTTCAAAATA ACAGTGCCGG GCTTGAAGTG TTAAAAACGG TGCCTCTGGG CGCTGCAAAT
CCGGTCAGTT TGCAAACAAC TAAAAAACAA TCGCAACAGG AAGTTAAAAA ACATAATGAC
CGATTAGAAG CATTATTAAA TGATCATCAA TTACAGCTGC AAACACAACC CTAA
 
Protein sequence
MKDVNEQLSA IVDNEFIDEK LIDELLINKD KQELFSRYHL IGDVMRGDIT DQFINFDISQ 
QVMAKIEQPT KIAAVVELDT PTEKSKNNVI SFVKRFGQYA IAASVAGVVV LASLVTSEPT
FQNNSAGLEV LKTVPLGAAN PVSLQTTKKQ SQQEVKKHND RLEALLNDHQ LQLQTQP