Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0066 |
Symbol | |
ID | 4624463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 88695 |
End bp | 89228 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639795258 |
Product | anti sigma-E protein, RseA |
Protein accession | YP_941539 |
Protein GI | 119943859 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3073] Negative regulator of sigma E activity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00955502 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.708681 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGATG TGAATGAACA ACTGTCAGCG ATTGTTGATA ATGAATTTAT TGATGAGAAG TTAATTGATG AACTACTGAT TAATAAAGAT AAACAGGAGC TATTTTCTCG TTATCATTTA ATTGGTGATG TGATGCGTGG AGATATTACG GATCAATTCA TTAATTTTGA TATTAGTCAG CAAGTAATGG CTAAGATAGA ACAGCCCACT AAAATAGCTG CTGTTGTGGA GCTTGATACT CCCACAGAAA AAAGTAAAAA TAATGTTATC TCTTTTGTTA AACGTTTTGG ACAATACGCG ATCGCCGCAT CTGTTGCAGG GGTAGTGGTG TTAGCAAGCC TTGTTACTTC TGAACCAACC TTTCAAAATA ACAGTGCCGG GCTTGAAGTG TTAAAAACGG TGCCTCTGGG CGCTGCAAAT CCGGTCAGTT TGCAAACAAC TAAAAAACAA TCGCAACAGG AAGTTAAAAA ACATAATGAC CGATTAGAAG CATTATTAAA TGATCATCAA TTACAGCTGC AAACACAACC CTAA
|
Protein sequence | MKDVNEQLSA IVDNEFIDEK LIDELLINKD KQELFSRYHL IGDVMRGDIT DQFINFDISQ QVMAKIEQPT KIAAVVELDT PTEKSKNNVI SFVKRFGQYA IAASVAGVVV LASLVTSEPT FQNNSAGLEV LKTVPLGAAN PVSLQTTKKQ SQQEVKKHND RLEALLNDHQ LQLQTQP
|
| |