Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0056 |
Symbol | |
ID | 4624453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 77684 |
End bp | 78361 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639795248 |
Product | DNA repair protein RadC |
Protein accession | YP_941529 |
Protein GI | 119943849 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.183755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0623388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAT TAAAAGACTG GCCCAATCAG GAAAGACCGA GAGAAAAATT GCTGCAAAAA GGCACAGCGG CCCTTTCTGA TGCTGAACTG CTTGCTATAT TTTTACGTAC GGGTTGCCGT GGTGTCGACG TCGTCACACT CTCCAAACAA CTGCTAAGTC AATTCGGCTC CTTACATGCT TTATTTGCTG CATCAGAATC AGATTTTTGT GAAAAAAAAG GGCTAGGACA GGCAAAATAT GTGCAATTAC AGGCCGTCCT TGAAATGTCC AGCCGCTATT TACAAGAACC CTTAAGTAAA GGTAACGCCT TAACCAGCGC CGCACAAACT AAAGCCTTCT TAATCGCTAA AATGCACAAT TTACCCTACG AGGTATTTGC GGCCATATTA TTAGACACAC AACATCGTAT TATTCGCTTT CATGAGTTTT TCTTTGGTTC AATCGACTGC GCAACAGTCC ACCCTCGAAT CATTGCGCAA AAAGTATTAT CTGAAAATGC CGCGGCAATT ATACTGGTCC ATAATCATCC TTCCGGCGAT CCGTCAGCAA GCGAAGCGGA CAAAATGATC ACCCAAAAAA TCGTTTCTGC ACTGCAATTA ATAGACGTCC GAGTTTTAGA TCATTTGGTC GTTGGGCACA AAAAATGTAC ATCATTTGCA GAAAATGGAT GGATTTAA
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Protein sequence | MTKLKDWPNQ ERPREKLLQK GTAALSDAEL LAIFLRTGCR GVDVVTLSKQ LLSQFGSLHA LFAASESDFC EKKGLGQAKY VQLQAVLEMS SRYLQEPLSK GNALTSAAQT KAFLIAKMHN LPYEVFAAIL LDTQHRIIRF HEFFFGSIDC ATVHPRIIAQ KVLSENAAAI ILVHNHPSGD PSASEADKMI TQKIVSALQL IDVRVLDHLV VGHKKCTSFA ENGWI
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