Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0053 |
Symbol | |
ID | 4623545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 76031 |
End bp | 76843 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639795245 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_941526 |
Protein GI | 119943846 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0620574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGAAT TACCGGAAGT AGAAACCAGC AGAAAAGGGA TCAGCCCGCA TCTTATTAAT AAATCGGTCC AGAATGTTGT GCTGCGGCAT ACTCAATTAC GCTGGAAAAT ACCGCAGGAT TTATTATCGG ACATTAAAGA TAAAATATTA CTTTCAATCG ATCGCCGTGC TAAATACCTG CTGTTCAACT TCACCAGTGG CACCTTGTTA ATTCACCTGG GCATGTCGGG CAGTTTACGA ATTTGCCCAT TGAATAGCCC GCCAAAAAAA CATGACCATG CCGATCTTAT TTTCGCAGAT TGTTTATTAC GCTATACCGA TCCACGCCGT TTCGGGGCCA TTTTATGGTT GGGTTTAACG CCGGAAGACT CGCCTCTATT AAATAAACTC GGTCCTGAGC CGCTCAATGA TGATTTTAAT GCGAAGTATT TATACCAGCA GGCGACTAAA CGAAAACTGC CGGTAAAACA ATTTATTATG GATCAAAAAG TCGTAACGGG TGTGGGTAAT ATCTATGCGA CGGAAGCCTT ATTTAATAGT GGCATCTCGC CAATAAGGGC GGCCGGCAAT ATCTCTGAAA AACGCTATCA AATATTAGTT ACTGAGATTA AAGAAATTTT ACAGCAAGCG ATAAAACAAG GCGGCACCAC CCTGAAAGAT TTTGTCGGTA GTGATGGTAA ACCTGGCTAT TTTCAACAGA CGCTACAGGT TTATGGTAAA ACAGGTCAGC AATGCCCTAG CTGCGAAACC CCTTTAAAAG CTGTTAAATT AGCCGCAAGA GCCAGTGTGT ATTGTCCGGA ATGCCAGAGC TAG
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Protein sequence | MPELPEVETS RKGISPHLIN KSVQNVVLRH TQLRWKIPQD LLSDIKDKIL LSIDRRAKYL LFNFTSGTLL IHLGMSGSLR ICPLNSPPKK HDHADLIFAD CLLRYTDPRR FGAILWLGLT PEDSPLLNKL GPEPLNDDFN AKYLYQQATK RKLPVKQFIM DQKVVTGVGN IYATEALFNS GISPIRAAGN ISEKRYQILV TEIKEILQQA IKQGGTTLKD FVGSDGKPGY FQQTLQVYGK TGQQCPSCET PLKAVKLAAR ASVYCPECQS
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