Gene Ping_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0049 
Symbol 
ID4623541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp69952 
End bp70944 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content42% 
IMG OID639795241 
ProductABC taurine transporter, binding protein inner membrane component 
Protein accessionYP_941522 
Protein GI119943842 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0656508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATA TTACTAAACC ATTTGCGACA AGTGCCGCAG AACTGGGTAT ATCAAAGATA 
AAAGAGATCA ACAGCAAGCC TGTCCCGGAA CAAAAAATGG TAGACACTAA GGAGGAAAGA
GCAACGGCAG CAGCGGCTGT TTCGTTTTTA GATAAGATCG AGCTTAAAAT AAAAAAATTA
ACTGCGCCAA GTGCAGTACC AAGTGGTGAA TATTTTGGCA CTCCAGGTGT TGGAGACAGT
CGTTTAATCA GTGTTTGCTC TACAATATTT TTTATTGCGA TATGGGCAAT CGCAACGGAA
GGTGGTTTTA TTAAACCCAT CTTTTTACCA TCCCCCTTTG ATGTGGTTGA ACGCCTAATT
GATATTACCG TTGATGGCTT TGCAGGCGCA ACGCTATTGG AACATCTTAA TGCCAGTTTA
GTACGCATTT TTGGTGCTTT TATATTAGCT TGTTTAATTG GTATTCCATT AGGTATTACT
ATCGGTTGTA ACCGTGTTTT CCGCGGTATC TTTGATCCAT TGATTGAGTT TTATCGCCCA
CTTCCTCCAC TTGCTTATTT ACCACTGATC ATTATTTGGT TAGGTATTGA TGAGTCCAGT
AAAGTGACAC TCATTTTCCT AGCGATGTTA GCTCCTATTG TATTAAGTGC ACGTGCAGGA
GTAACGTCAG TTCGAATTGA GCAAATCCAA GTCGCTTACT CAATGGGTGC CAGTCCATGG
CAGGTAGTTA CCCAAGTTAT CGCTCGTGGT GCAATGCCGG ACATAATGAC CGGTATGCGT
ATCGCCATTG GATTTGGCTG GACAACCTTA GTGGCTGCTG AAATGGTGGC TGCAGAACAA
GGTATCGGTT TTATGGTGCT TAATGCCTCG GAGTTTTTAG TAACGGATGT GGTTATCGCG
GGTATTTTAG TGATCGGGAT CATTGCCTAC TGCTTTGATT TACTGATGCG TTATTTGGAA
GCAAAACTGA TCCCCTGGAA GGGTTACAAC TAA
 
Protein sequence
MTNITKPFAT SAAELGISKI KEINSKPVPE QKMVDTKEER ATAAAAVSFL DKIELKIKKL 
TAPSAVPSGE YFGTPGVGDS RLISVCSTIF FIAIWAIATE GGFIKPIFLP SPFDVVERLI
DITVDGFAGA TLLEHLNASL VRIFGAFILA CLIGIPLGIT IGCNRVFRGI FDPLIEFYRP
LPPLAYLPLI IIWLGIDESS KVTLIFLAML APIVLSARAG VTSVRIEQIQ VAYSMGASPW
QVVTQVIARG AMPDIMTGMR IAIGFGWTTL VAAEMVAAEQ GIGFMVLNAS EFLVTDVVIA
GILVIGIIAY CFDLLMRYLE AKLIPWKGYN