Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0047 |
Symbol | |
ID | 4623539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 68054 |
End bp | 69061 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639795239 |
Product | taurine ABC transporter, periplasmic binding protein |
Protein accession | YP_941520 |
Protein GI | 119943840 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4521] ABC-type taurine transport system, periplasmic component |
TIGRFAM ID | [TIGR01729] taurine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0299581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT GTAAACCACT CAAAATAATG GCCGCAATGG CTGGACTATT TTTTGCTTCA ACGTTAGCGG CAAAAGATGT CACTATCGGT TACATGGGGA TGAATAACCC TTGGAAGCAT GCGATTAACG AAAAGTTAAT TGAGAAAGAA ACGGGTTACA AGGTTGATTG GAGACGTTTT TACTCAGGAT CAAAAGTGAT CACTGCGATG GCATCAGGAT CAATTGATAT TGCTTCTGCG GGGTCTAGCC CAATTGCTGC GGCAGTAAGT CATGGTATCG AGATTGAATT AGTTTGGATT CTAGAAAACA TTGCCGATGC AGAAGCGCTT GTTGTACGTA ATGGTGCAGG GATCACCTCT CCATCAGATT TAAAAGGCAA GCGTATTGCG GTCCCTTTTG TATCAACCAC TCACTTCCAT ACTTTGTTTG CTTTAGAGCA GTTTGGGCTG TCTGATGAAG ACGTTAGATT AATCAATATG CAACCAAATA CCATTGGTGC AGCATGGGAA CGTGGTGATA TTGACGGCGC GTTTATCTGG GATCCTGTAC TGGGTAAAAT CAAAAAAGAC GGTAAAGTTT TAATCACTTC AAGAACCTTA AGTTCTTGGG GTAAGCCAAC CTTTGATGGT TTGGTTGTCG ATAAAAAATT CGGTAAAGAA AATGCAGATT TTATGGCTAA AGTACTGAAA ATTGCCGCTG ATCTTGACCA AGAGTACCGT AGTAATAAAG AGTCTTTTGA TGCCACTCAC CCAATTGCTA AATCAATTTC AAAAATTTCG GGTAGTGACG TTAACGACGT CGCCGGTGTG TTAGACCTAT ATGAATTCCC TGACTTTGCT ACGCAACTAT CATGCAACTG GCTTGGTTGT GGTATGGAAG GTGGTGCTGC TAAGTCACTT AAGTCAACGT CAGAGTTCCT GAAAAAAGGA AAGAAAATAA ATGATTTAAT GCCAGATTAC AGTGTTTTTG TTAATCCTGA ATACGCGCTT GCAGCCTCTA AATTATAA
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Protein sequence | MKKCKPLKIM AAMAGLFFAS TLAAKDVTIG YMGMNNPWKH AINEKLIEKE TGYKVDWRRF YSGSKVITAM ASGSIDIASA GSSPIAAAVS HGIEIELVWI LENIADAEAL VVRNGAGITS PSDLKGKRIA VPFVSTTHFH TLFALEQFGL SDEDVRLINM QPNTIGAAWE RGDIDGAFIW DPVLGKIKKD GKVLITSRTL SSWGKPTFDG LVVDKKFGKE NADFMAKVLK IAADLDQEYR SNKESFDATH PIAKSISKIS GSDVNDVAGV LDLYEFPDFA TQLSCNWLGC GMEGGAAKSL KSTSEFLKKG KKINDLMPDY SVFVNPEYAL AASKL
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