Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0045 |
Symbol | |
ID | 4623537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 65289 |
End bp | 66059 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639795237 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_941518 |
Protein GI | 119943838 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00292404 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACACAA AATTAATGCC CACCGTTTTA ATCACCGGAG CAACATCTGG ATTTGGGCTG GCAACCGCGA AAAAATTTGC TCAACATGGT TATCCATTAA TTATTACTGG CCGTAGAAAA GAACGATTGC AGAAGCTCAG CGATCAACTA TCACCAATAA CAGATGTCTT TTTTTATCAG TTAGATGTAC GTGACAGTGA GGCTATAAAA ACATTTACTC AGGCTATTCC TGATAATTTT AAGCAGGTAT CAATATTGGT CAATAATGCA GGTCTTGCTT TGGGCACAGA GTCTGCAGAT AAGGCATCAC TGGATGACTG GCATACAATG ATAGATACCA ATGTCACGGG ACTGGTCAAT GTGACTCACA GTTTGTTACC TATATTACGT AAACAAGCAT CGGCCAGTAT TATTAACCTT GCGAGCATAG CAGCTAATTG GTCTTATCCG GGCAGCCATG TTTATGGTGC AAGCAAAGCA TTTGTGGCAC AATTTTCCAG AAATCTGCGC AGTGACTTTG CCGGGACCGG CGTACGCGTT ACCAGTTTAG AACCGGGTTT ATCTGAAAGT GAATTTAGCC TGGTAAGGTT TAAAGGGGAT AAAGAAAAAT ACCAGCAAAT TTATAACAAT GCTGATGCCC TACAACCTGA AGATATCGCT AATATTATAT TCTGGATAGC AGAGCAGCCT GCTCACATTA ATATTAACAG TATAGAAGTG ATGCCAACCT CTCAGGCTTG GGATAACTTT AAAATAATTA AGCATCCCTA A
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Protein sequence | MNTKLMPTVL ITGATSGFGL ATAKKFAQHG YPLIITGRRK ERLQKLSDQL SPITDVFFYQ LDVRDSEAIK TFTQAIPDNF KQVSILVNNA GLALGTESAD KASLDDWHTM IDTNVTGLVN VTHSLLPILR KQASASIINL ASIAANWSYP GSHVYGASKA FVAQFSRNLR SDFAGTGVRV TSLEPGLSES EFSLVRFKGD KEKYQQIYNN ADALQPEDIA NIIFWIAEQP AHININSIEV MPTSQAWDNF KIIKHP
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