| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0040 |
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| Symbol | |
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| ID | 4623532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 58562 |
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| End bp | 59389 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639795232 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_941513 |
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| Protein GI | 119943833 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase
[TIGR00654] phenazine biosynthesis protein PhzF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00697529 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATTC AATTTTCAAA AATGCACGGC TTGGGTAATG ACTTTATGGT CATTGATAAC
GTCACGCAAA ATGTATTCCT TTCTAAAGAT ACGATCAGCC GTTTGGCGGA TCGTAATTTT
GGTATTGGTT TTGACCAATT ATTAATGATT GAGCCCCCCT ATGATCCTGA GCTTGATTTT
CATTATCGTA TTTTTAACGC AGATGGCAGT GAAGTAGAGC AGTGCGGTAA TGGTGCGCGT
TGTTTTGCCC GTTTTGTTAA AATGAAAGGT TTGACACAAA AGCGGATTAT TAACGTCAGT
ACCGCCAAGG GCAAAATTCA GCTCAAAATT GAGCATGACG GTAATATTAC TGTGGATATG
GGTAAACCTA TTCTAGAGCC TGCAAAAGTA CCTTTCGAAG CTCAGAAAGA GGAAAAAACT
TATATTCTCC GTGTAGAAGA CCATACTGTT CTATGCGGAG TAGTATCAAT AGGTAATCCA
CATTGTGTGG TGTTGGTTGA CGATATTGAT AACGCTCCGG TTGAAACCTT AGGTCCGTTA
TTAGAAAATC ATGAACGTTT TCCCAACAAG GTCAATGTGG GTTTCTTAGA AATAAAAAGT
CGCGATCATG CCCGCTTAAG AGTTTGGGAG CGAGGGGTAG GTGAAACATT AGCCTGTGGC
ACTGGAGCTT GTGCGGCGGC CGTCGTGGGT CAATTACAGG ATAAATTAAA TCCCCACTGT
ACTATTGAAT TACCTGGCGG TGAACTGCGC TTATTTTGGC AACCCGGACA AAGTGTAAAA
ATGACCGGCA CAGCTGATTT TGTCTTTGAT GGACAGATTC AAATTTAG
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| Protein sequence | MNIQFSKMHG LGNDFMVIDN VTQNVFLSKD TISRLADRNF GIGFDQLLMI EPPYDPELDF
HYRIFNADGS EVEQCGNGAR CFARFVKMKG LTQKRIINVS TAKGKIQLKI EHDGNITVDM
GKPILEPAKV PFEAQKEEKT YILRVEDHTV LCGVVSIGNP HCVVLVDDID NAPVETLGPL
LENHERFPNK VNVGFLEIKS RDHARLRVWE RGVGETLACG TGACAAAVVG QLQDKLNPHC
TIELPGGELR LFWQPGQSVK MTGTADFVFD GQIQI
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