| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0030 |
|---|
| Symbol | |
|---|
| ID | 4624960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 46717 |
|---|
| End bp | 47796 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639795223 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_941504 |
|---|
| Protein GI | 119943824 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.108145 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGC AGACAAAACT TTCTAAACAA GCCTTACAAA ATAGAATTAA AGGCTTAAGT
GACGAACCGC CCGCGATAAG TGAGATTGAT TTTTCGAATC AGGATTATCG TGGTATTGAT
CTTTCCGGCG GCGCTTTTAG CAAGGTTAAT TTTACAGAAT GTGATTTTAG CGGCGCTAAC
TTGCAACAAG CTACTTTTGT TGAATGTAAT TTAAATAATG TGAACTTTAG CCGCAGTCAG
CTTGCTGGTT GTAATTTTGT CAAGTGTACG GCTAATAAAG CACTTTTTCA TTCGGCCATG
GGTGAAGGGG TGAATATTAT TGAAAGTGAT TTTAGTCTGG CGGTATTTGA TGGCTGGTTA
TGTAAACAGC TGAATGTGGT TGAAAGTAAT TTGAAGGGAA GTCATTTTCA AGGCTGTCAT
CTCTTTGAAG CAAACTTTAT CACCTGTCAG CTAAGCCGTT CTTATTGGGT AAACTCAGTG
CATTATCGCA GTAACTATAT TGACTGTGAA TTTGATCAGG CTAATTTTGA CCAAGCTGAA
CTGGAATTAG TCTTTTTTCA AAATGCTAAC TTTGATAACT TTGATTTTAC TAAGGTGGTC
ATTAAAATTT GTCAATTTAG AGAAAGCACC CTGCAAAATG CTAATTTTTC GCACTGTGAT
TTAACCCAGT GCGGCTTTAT GGAAGCCAAG CTTAATAGAA CCAATTTTAA GGGTGCTATT
GCCAATAATG CCATGTTTAT CAAAGCACAA ATTAACAACA GTGATTTTAG AGATTGCCAG
TTGGAACAAG CGTTGTTTAA TGAGGCAACA GTCAGACAAA GTAATTTTGC AAAGGCAAAA
TTAGTGCAGG CACAGTTTAC CGATGCGGAT CTCTCACAAA GCAGTTTTGA TGGCTGCGAT
TTAACCTATG CCGATTTTTC CAATGCAAAT TTAAGTGGCG CTTTAATCAG TCATGCCAGC
TTATTTCGAA CTAACCTGCA TTGTATTATT GAAGAAAAGA CGAATTGGTT TGGCAGTAAT
AAAAGTCTCA CATTAGCCAC GGACAAAAAG AAACAGGCAG CTGAAAATTT TAGTAAGTAG
|
|---|
| Protein sequence | MAKQTKLSKQ ALQNRIKGLS DEPPAISEID FSNQDYRGID LSGGAFSKVN FTECDFSGAN
LQQATFVECN LNNVNFSRSQ LAGCNFVKCT ANKALFHSAM GEGVNIIESD FSLAVFDGWL
CKQLNVVESN LKGSHFQGCH LFEANFITCQ LSRSYWVNSV HYRSNYIDCE FDQANFDQAE
LELVFFQNAN FDNFDFTKVV IKICQFREST LQNANFSHCD LTQCGFMEAK LNRTNFKGAI
ANNAMFIKAQ INNSDFRDCQ LEQALFNEAT VRQSNFAKAK LVQAQFTDAD LSQSSFDGCD
LTYADFSNAN LSGALISHAS LFRTNLHCII EEKTNWFGSN KSLTLATDKK KQAAENFSK
|
|---|
| |