| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0023 |
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| Symbol | |
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| ID | 4624953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 31751 |
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| End bp | 34876 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639795216 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_941497 |
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| Protein GI | 119943817 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAT ATCATTTCAA ATTCATCTAT CAGGAAAATG GTTCGCAAAA TAATGAGTTA
ACATTATTGA AATTTTCCGG GCAGGAAGGT ATCTCCCAAT TATTTAATTT TGAATTGGAG
CTTAAATCCA CCGATCTTAA TTTAGATGAA GATAGCCTGT TAAACAAATC CTGCAGCATC
GAAATTTATG ATGGCAAGCA AGCTAAACCT ATTCGTATTA TCCATGGTTT AGTCAATAAA
TTTGAAGATA TTAACTACCT GCCTGACTGC ACCTTATACC GCGCTAATAT TGTACCTAGA
ATCTGGCAGC TCGGATTGTT TGAAACCAAT GAAGTATATT TAAACGAAAC AATTGAGCGA
ACACTCAGCG CCATATTAGA GGAAGCTGGC TTTATTGAAG GGCAAGACTT CCGTTTTGAA
CTGAACCGCA CTTACCGTAA ATGGCCCTTC AGGCTGCAAT ATAACGAAAC CCATTTAGAT
TATCTGCAGC GCATTATCGA GCGTGAGGGA ATTTATTATT ATTTCGAACA AAACGATAAT
GCCGAGGTGA TTGTCTTTTG TGATAATAAC CAGGCGTTGC CATCAATCGT CCAGCCCGAC
CAAAGCAAAA AAATTGTGTT TCAGGCCAAT AGCGCTATTA ATGTCGAAAG CAAGGCTTGC
ACAGTGACCA ATATTATCTG TAAGCGCCAG ACGCTGCCAA AAAAAGTGAC ATTACGTGAT
TTTAATGATG AGACCCCCTC CTTAGATATT CGTGGTGAAT ATATTATTGA TAAGACTGGT
ATGGGGGAAA TTAACCTCTA CGGGCTAAAT ATAACCTCAC CCGAAGAAGG TCAGCAATTG
GCGGAAATAC ACGCTAATGC CTATTTAAGC CGTCAAAAAT CCTATATTGG TGAAGGTGAT
GCGGCCACTA TGGTCATAGG TCATACTTTT AAGCTTGCCA AACATCCCAG AGATAAGTTT
AACCAGTTAA CCTACTTATT AGAAAGTATT GATCATGAAG GTGCTAATTT AAATCAATAT
CAGGAATTGG ACTTAAATAC CGATGCCGTA GTGAACTACA GCAACAGCTT TACCGCGCTT
TCAACTGAGC ATCCATTTGC CCCGAAAAGA CAAACGCTCG CCCCTGAAAT TAACGGTACG
CTGAATGCGG TTATCGATGC TGAAGCGGAT TCCGGCTATG CGGAGCTCGA TGAATTTGGC
CGTTACAAAG TCAAACTGCC CTTTGACAGA AAAGATCGCA ATGGCGGCAA GGCTTCTCAT
TGGGTACGTA TGATGCAGCC CTATGGCGGC GCAAATGAGG GGATGCATTT TCCGCTGCGC
AACGGTACGC GGGTATTATT AGGTTTTATT GGCGGCGATC CGGACAGACC CTTTATTAGC
GGCACTATTA ATGATAATGG CGAGCAGAAA AGTATTGTCA CCGGTGAAAA TCAAACCAAT
AATCTTATAA AAACTGCCTC GGGCAATAAA ATAGAGCTGG AAGACAAAGA AGGTAAAAAC
CGCATTAAAC TGCAGACGGG TGATAATAAA ACCTATATGC ATTTAGGCTC GCCCAATCAT
CCCGGCGATG GCTTTGTCGT GATGTCTAAG GGAATAGAAC GTAAAGAGGT GACGGGAGGT
AAGCAAATTA CACGTGTTAC TACAAACTTT GCGACTACTG CTTACCTTAA TGATGATAAT
ACCTTAGGAA GCTTCCATAA CAGCTTCGAT GAAGATACAA GTTCTGTTGA AAGTGAAGAT
TTGTTAGATG AACAAAATTA TTTTTTATTT CCAATAAAAA GTCTCAAAGG TGATGGGGTA
GCTGCTGCTG ATGCTGTTCC GGAGGTTCCG GCTAAAGCTG CTCGTACTTC TCCTGATGTT
GCTGCTGAAG CTGCTATCCC TGCTGTTGCT AGTACATTTA CGGCTTCATC AGTTTTGAGT
TTGCCTGCAG ATAACTTGAT GACAAGAAAT GTTGAGTTAT CTGGTTATTA CCTTATAGAA
AGAACGCTGG GTGATAAATA TACTTTTGAG CAGGGAAATG AATATGAATT TAATTCGCCG
GGGGATAAAC GCTTTCAGTA TGGTGCGGAC AGAGAAATTA TAGTGTGTCA AGATGATGCA
AGTTTAGGTA AGAGTATTAA AGGCGAAGTT TATAATAAAG AAAATCACCT CAAAGAAAAT
CAAAACAAAA ATCGTAATCT CGATGCAGGA AGCAGGTTAT ACAGGTCTCT TGTCGAGTTG
TTGACCCTTA AACTTACAGG TTACCAAAGT TTTACTCAAT CTCCCCTGGA TGGGATCTGT
AAGAGATTTC ATAAAAAATT AACACCCGAA GAAGCCAACG ACCTGTTAGA TAACAAGTGT
AATTTCAGAG TAGCCAGACA CAATACCTTT AATATTCAGG AAGGTAATAT TTTTGATTTT
GGCGGTTATT GGAATTATGA CTTGGGCAAC AGTTATGCGG AAGTACATGG TACACAAGAG
ACTGAAATTA ACAAATTATA TTCTAAGGAT ATAGCCAAAA AAGCAGGCCC ATGGTGGGAG
AAAATCGAGG GTAAAAAGCT TAGTTTTGCT CAGAAAGATG AAGAACAGGT AGAAAAATCA
TATAACAACC AATATAGCTA TACTAAGGGC AAGACAATCG AAGTACATAA GGGCGATGCA
GAAAGTCAGC ATTATGGTAA TTCTTATGAT TATCATACAG GTGATAGTTA TGAAGAAGTT
GATGGTCATT CTATTTCTCA TGTTCGTGGT AGTTGTCATA GCACACATCA TGGAGCGACT
AATGAGATGT TTATGGGGGC AAAGAGTGAG TTTCTATTAG GAGTGTCTAG CTCTGTCGTT
GTTGCAGCAG TTAATGATAT GTTTGTAGGA CCTAAAATTG AAATACAAGT CGCTCCAGGC
TTTTACTTCA GTGCTGGTTC CAAAACGGAA ATTGAATCTT TTAAATTTAA AAACGTGGCG
ACAGAAGCCG CAAATGCAGC TATTGATTTA CAAGCTGCTA TTGCCACAGT AGACAATGAT
ATAACGATAT TAATGAATAG TATCAACACT ATACAAAGCT CAGTAAACAC TGTTGTTACT
AAAGCTAATG AAGTTGACTT TACGATGATA AAGTTATCAT CGGGCGCAGT GAACATGCTG
AATTAA
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| Protein sequence | MSQYHFKFIY QENGSQNNEL TLLKFSGQEG ISQLFNFELE LKSTDLNLDE DSLLNKSCSI
EIYDGKQAKP IRIIHGLVNK FEDINYLPDC TLYRANIVPR IWQLGLFETN EVYLNETIER
TLSAILEEAG FIEGQDFRFE LNRTYRKWPF RLQYNETHLD YLQRIIEREG IYYYFEQNDN
AEVIVFCDNN QALPSIVQPD QSKKIVFQAN SAINVESKAC TVTNIICKRQ TLPKKVTLRD
FNDETPSLDI RGEYIIDKTG MGEINLYGLN ITSPEEGQQL AEIHANAYLS RQKSYIGEGD
AATMVIGHTF KLAKHPRDKF NQLTYLLESI DHEGANLNQY QELDLNTDAV VNYSNSFTAL
STEHPFAPKR QTLAPEINGT LNAVIDAEAD SGYAELDEFG RYKVKLPFDR KDRNGGKASH
WVRMMQPYGG ANEGMHFPLR NGTRVLLGFI GGDPDRPFIS GTINDNGEQK SIVTGENQTN
NLIKTASGNK IELEDKEGKN RIKLQTGDNK TYMHLGSPNH PGDGFVVMSK GIERKEVTGG
KQITRVTTNF ATTAYLNDDN TLGSFHNSFD EDTSSVESED LLDEQNYFLF PIKSLKGDGV
AAADAVPEVP AKAARTSPDV AAEAAIPAVA STFTASSVLS LPADNLMTRN VELSGYYLIE
RTLGDKYTFE QGNEYEFNSP GDKRFQYGAD REIIVCQDDA SLGKSIKGEV YNKENHLKEN
QNKNRNLDAG SRLYRSLVEL LTLKLTGYQS FTQSPLDGIC KRFHKKLTPE EANDLLDNKC
NFRVARHNTF NIQEGNIFDF GGYWNYDLGN SYAEVHGTQE TEINKLYSKD IAKKAGPWWE
KIEGKKLSFA QKDEEQVEKS YNNQYSYTKG KTIEVHKGDA ESQHYGNSYD YHTGDSYEEV
DGHSISHVRG SCHSTHHGAT NEMFMGAKSE FLLGVSSSVV VAAVNDMFVG PKIEIQVAPG
FYFSAGSKTE IESFKFKNVA TEAANAAIDL QAAIATVDND ITILMNSINT IQSSVNTVVT
KANEVDFTMI KLSSGAVNML N
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