| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0015 |
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| Symbol | |
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| ID | 4625104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 20951 |
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| End bp | 22315 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639795208 |
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| Product | hypothetical protein |
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| Protein accession | YP_941489 |
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| Protein GI | 119943809 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.947734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTCAA TGAAGTCGAT ATATTGGAAT CAGGGGCTAT TTTTAAAACC TCAGCATTTT
CAACAGTTAG ATAGATATAC ATCCACTATG TCTAATCTAT ATTCTAAAGT TCGTAGCGGC
GTAGAATCAG GTATTTCAGA ATTAAAATTT GATCTTTCTG CTTTGAAAAC AGGTTTATTA
GTCATTGAAA AGTTGGAATG TATATTAGAA GACGGCAGTT TACTTTTATA CCCGGGAAAC
TGTCAAATTC CACCATTAAG GTTAGACAAA GAGCAGTTTG ATGACAGTGG GAATCTGAAT
ATATTTATTG CTTTAGCACC CATTTCTGCA GAGCAAAATA ATTTAGTTTC AAATTCATCA
CCCGATGCTC GCTTTAAGCT TGCCGCTGAT ATCAATAAAA AAGATCTATT TGATAATAAT
GAACAAGCAA CGTTATCGAT GTTAGATTTT AATTGTAATT TAGTTCCAAG CTATAATTTG
AAAAGTACTG CGGGTTTATC TCTTCTTAAA GTAGCTGAAA TATTTTTATC GGTTGATCAA
TGCACACCTT CAGAAACTTT TATTCCTAAG ATAACGTTAT TAAGCGGTTC TGAAGTACTT
AAGAATTTAG TCAAATCAAC TAAACAAAGT TTAGTCGGGC GATTTGAACA ACTTCAAAAT
ATAACCTCTT TTGAATCAGG ACTTGTAAAT AGCTCAAATA ATTTATCTGT CGGTTTAGCG
ATGATGTCAA TTAGTAATCA TATTGCCACA TTTATCCAGT TTGAAGAAAA TCCATCAACA
CAAGTCTCTG ATATTTATCT GGCTTATCGA CAATTAATCT CACAATTGAG CATGTTTTCG
ACAGAAGTTT CAGTTATTGG TGAAACCCTT ACTGAAGAAA ATTCTATTAT CCCGTTTAAT
CAAAATAATT TAAGCGATTG TTTTTCTAAA GTAAATAATC TGACAACTAA ATTATTAAAC
GAGTTGACCG TTCAGCCTGA ATTATTAGTT AATTTAATTT ATCAGGGTGA TTCAAAATTT
GTAGCCCAAT TATCGCGTGA ATTTTTAGAT CCCGGTTACC GGATTTATCT AAGAATTAGA
ACCAAAGAAA ATGTCATTGA TCATTTAGAT AATATTCTTA ATTTTCTAAA AGTTGGGGCC
GATGGACAAG TTGATGTTTA CTTGAAAAGA GCACTTCCGG GAGTTCAATT GTCGTATTTA
GATAAAAAAC CCCAAGGAGT TGCGACTGTC CCGAATAGCT ATTATTTTGG TCTTGATAGG
CAGTCCTTCC AATGGCAGAA AGTCATTGAG TTAAGCCGAA TTGGTGTTAT TTGGAGTGAT
TATATAGAAG ACGTTGCTCT CGATTTGATC GCTGTTCAAG GATAA
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| Protein sequence | MDSMKSIYWN QGLFLKPQHF QQLDRYTSTM SNLYSKVRSG VESGISELKF DLSALKTGLL
VIEKLECILE DGSLLLYPGN CQIPPLRLDK EQFDDSGNLN IFIALAPISA EQNNLVSNSS
PDARFKLAAD INKKDLFDNN EQATLSMLDF NCNLVPSYNL KSTAGLSLLK VAEIFLSVDQ
CTPSETFIPK ITLLSGSEVL KNLVKSTKQS LVGRFEQLQN ITSFESGLVN SSNNLSVGLA
MMSISNHIAT FIQFEENPST QVSDIYLAYR QLISQLSMFS TEVSVIGETL TEENSIIPFN
QNNLSDCFSK VNNLTTKLLN ELTVQPELLV NLIYQGDSKF VAQLSREFLD PGYRIYLRIR
TKENVIDHLD NILNFLKVGA DGQVDVYLKR ALPGVQLSYL DKKPQGVATV PNSYYFGLDR
QSFQWQKVIE LSRIGVIWSD YIEDVALDLI AVQG
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