| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0013 |
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| Symbol | |
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| ID | 4625102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 19699 |
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| End bp | 20217 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639795206 |
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| Product | secreted protein Hcp, potential oxidative stress protein |
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| Protein accession | YP_941487 |
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| Protein GI | 119943807 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTACTG AAATTTATAT GTCCATTAAT GACCCTGAAG GGTGTTTAAC AGAAGAATCT
TGTTCAAAAG AAAGTATAGG TTCATTCTTT AAGGCCGATC ATGAAGAAGA GTCATTAATT
CTAGCTTACG ATCATAAAGT AAGTGTGCCA ACTAATTCAT TAACGGGACA GGTGACAGGG
ACAAGGAAAC ATGAATATCT GGAGGTCAGT AAATTTATAG ATAAAAGCTC CCCCTTATTG
CTTAATACTG TGACCTCCCC ATCGGAACTG GAAGTCATTT TGAGGTTCTT TAGAACCCCG
GATGAAACCA GTGCAGGTGA ACCTGTAGAG TATTACAACA TCACTTTGCA GCGCGCTAAA
ATTGTGAGTA TTAATACAAT ATCACCTAAT ATTTTAGATG AAGTAAATGA CGGTTTAATG
CCCTATGAAA AGGTCAGGTT TACTTATGGG CAAATTCAAG CGGATCATGT GGTTTGTGGA
ACAACTGCGA TTGATGATTG GTCTGGGGAA GGCGGTTAG
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| Protein sequence | MPTEIYMSIN DPEGCLTEES CSKESIGSFF KADHEEESLI LAYDHKVSVP TNSLTGQVTG
TRKHEYLEVS KFIDKSSPLL LNTVTSPSEL EVILRFFRTP DETSAGEPVE YYNITLQRAK
IVSINTISPN ILDEVNDGLM PYEKVRFTYG QIQADHVVCG TTAIDDWSGE GG
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