Gene Ping_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0006 
SymbolargS 
ID4625095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp10601 
End bp12349 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content40% 
IMG OID639795199 
Productarginyl-tRNA synthetase 
Protein accessionYP_941480 
Protein GI119943800 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0018] Arginyl-tRNA synthetase 
TIGRFAM ID[TIGR00456] arginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.653166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGC ATATCCAGCA ACTACTCGAG CAAGCTATCG TTTGCCTTAT AAAACAAGAA 
ATTATTCCTG CGGATATCCA GCCTCGCATC AATATTGATC GCACCAAAGA TAAGTCCCAC
GGTGACTACG CAAATAATTT AGCATTAATG TTAGCAAAAC CTGCCAAACA AAATCCCCGC
CATCTTGCTG AACTGATTAT TGCCAACATA CCTGAATCGA CGTTAGTTAT AAAAATGGAA
ATAGCGGGAC CTGGATTTAT TAACTTTTTT ATTAATCCTA ATTTCCTCGA AAAACAGATT
GATGGCGCTT ATTTGGATAA AAGATTAAAT GTACAGATAG AAGCCAATCC GCAAACAATA
GTAATAGATT ATTCCTCGCC AAATCTGGCC AAAGAGATGC ATGTTGGTCA CCTGCGCTCA
TCTATTATTG GTGATGCGGT AGCGCGCACC TTAGAATTTA AAGGTAATAA CGTTGTCCGT
CAGAACCATG TCGGTGATTG GGGCACTCAG TTTGGTATGT TGCTCGCTTA CATGGAAGAA
TTACGAGCTA AAGGTGAGCC CATTGAAAAT AATCTGGCTA ATTTAGAGAT TTTTTATCGT
GCTGCAAAAG GACGTTTTGA TGAATCAGAA GATTTTGCAA CCCGTGCACG ACATTTAGTG
GTTAAACTCC AGGGTGGCAA TAAAGACTGT TTAAAACTGT GGGCAAAATT TAATGAAACC
AGTCTTTCAC ACTGCCAGGA AACCTATCAG CGTTTAGGTG TAAGCCTAAC CCGTGCAGAT
GTCCGGGGAG AAAGTAGTTA TAACGATCAG TTAGCGGTGG TTGTTGAAGA TCTTGATAAA
CAGGGTTTAT TACAACAAAG CCAAGGCGCT AAATGTGTCT TTTTGGATAA CTTTAAAAAT
AAAGAAGGCG ACCCTTTACC TGTTATTATT CAAAAGAAAG ATGGTGGTTT CCTCTATGCA
ACATCGGATC TCGCTGCGAT GCGTTATCGC CAGAATGAAC TTAATGCCGA TCGCATTCTT
TATTTTGTAG ATGCCCGCCA GGGTTTACAC TTCCAGCAGG TTTTTGAAGT TGCCCGTTCA
GCGGGTTTTG TTAATGAGAA AACATCTCTT GAACATATGC CCTTCGGGAC AGTAATGGGA
GAAGATGGTC GCCCATTTAA AACCCGTTCA GGGGCGGTTG CCAAATTAGC GGATTTATTA
ACAGAAGCAG AAGTGCGTGC TTATGAATTA GTAAAAGAAA AAAACAAAGA GATGTCTGAA
CCAGAGCTTC GTCATATCGC TTCCGTGGTG GGTATCTCTT CGGTTAAATA TGCCGATCTT
TCTAAAAATC GTACCAGTGA TTACACTTTT AGTTTTGATA GCATGTTAAG TTTTGAAGGT
AATACCGCGC CGTATCTACT TTATGCATAC ACCCGTGTTG TTAGTATCTT TAATAAAGCG
GGAATTGAGA TGGGCAGTGT CACTGCAGCG GTTTCTTTAA CCCAAGAGAA AGAAATAGAC
TTGGCCAATA AACTGATTCA ATTTAATGAT ATTATTGATC AAGTTGCTAA ACAAGGTATG
CCGCACTTTT TATGTTCATA CTTGTTTGAA TTAGCAGGAC TCTTTTCAAG CTTTTATGAG
GCTTGCCCTA TTTTGATTGC CGAAACGGAA ACACAAAAAC AGAGCCGCCT GAAACTGGCT
GGATTAACCG CTAAAACGCT TAAGCAAGGT TTGTCATTAC TGGGAATTAA TACGCTGGAG
CGCATGTAA
 
Protein sequence
MKVHIQQLLE QAIVCLIKQE IIPADIQPRI NIDRTKDKSH GDYANNLALM LAKPAKQNPR 
HLAELIIANI PESTLVIKME IAGPGFINFF INPNFLEKQI DGAYLDKRLN VQIEANPQTI
VIDYSSPNLA KEMHVGHLRS SIIGDAVART LEFKGNNVVR QNHVGDWGTQ FGMLLAYMEE
LRAKGEPIEN NLANLEIFYR AAKGRFDESE DFATRARHLV VKLQGGNKDC LKLWAKFNET
SLSHCQETYQ RLGVSLTRAD VRGESSYNDQ LAVVVEDLDK QGLLQQSQGA KCVFLDNFKN
KEGDPLPVII QKKDGGFLYA TSDLAAMRYR QNELNADRIL YFVDARQGLH FQQVFEVARS
AGFVNEKTSL EHMPFGTVMG EDGRPFKTRS GAVAKLADLL TEAEVRAYEL VKEKNKEMSE
PELRHIASVV GISSVKYADL SKNRTSDYTF SFDSMLSFEG NTAPYLLYAY TRVVSIFNKA
GIEMGSVTAA VSLTQEKEID LANKLIQFND IIDQVAKQGM PHFLCSYLFE LAGLFSSFYE
ACPILIAETE TQKQSRLKLA GLTAKTLKQG LSLLGINTLE RM