Gene Mkms_5471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5471 
Symbol 
ID4613155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5708508 
End bp5709170 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID639795165 
ProductGntR family transcriptional regulator 
Protein accessionYP_941446 
Protein GI119871494 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.969771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.33272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAC GCTACGGAGT CAAGGAGAAG GACCAGGTCG TCGCGTACGT CGTCGACCTG 
GTCCTGACCG GCCGGTTGCG CGGCGGGCAC CGCATCGACC GCAACGCGAT CGCCGAGGCG
CTCGGGGTGA GCCGGGTGCC GGTCCAGGAG GCGATGGTCC AGCTCGAACA CGACGGCATC
GTGTCGACGC GGTATCACCG GGGTGCGTTC GTCGAACGCT TCGACGCGGC GACGCTGCAC
GAACACCACG AGCTGTACGG CGTGCTCACC GGCATCGCCT CCGCGAGGGC GGCCACCGAC
CCGAACCCGG AACTGCTCGG CGAACTCGAC GACACGCTGC AGCATATGCG AAAAGGCAAG
GATCGCAGGT TGTTCCACGA AGGTTGCCAA CGGTTCCGCG ACATCGTCAA CGAAGCGTAC
GCCGGCCCGC GGCTGCACGC GGCGATCCGC GCGTCGCAGT GTTTCGCGGC GTCGGACTTC
TGGGTGTCCT ATCCGCGGGT GCGGGCGGAA TTGCTGCCGA CCTACCAGCA GGAGGCGACG
GCCATCGCCG CGCGGGACGC CGCCGGCGCA CGCACCGCCT GCCTCGAGCG GTCCGACCTC
ATGGCCACGA TCATGGTCGC CGAGCTGACC CGCCGCGGCG TGCTGGCGGG CGACGGTGGT
TAG
 
Protein sequence
MPKRYGVKEK DQVVAYVVDL VLTGRLRGGH RIDRNAIAEA LGVSRVPVQE AMVQLEHDGI 
VSTRYHRGAF VERFDAATLH EHHELYGVLT GIASARAATD PNPELLGELD DTLQHMRKGK
DRRLFHEGCQ RFRDIVNEAY AGPRLHAAIR ASQCFAASDF WVSYPRVRAE LLPTYQQEAT
AIAARDAAGA RTACLERSDL MATIMVAELT RRGVLAGDGG