| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5455 |
|---|
| Symbol | |
|---|
| ID | 4613139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 5689468 |
|---|
| End bp | 5691816 |
|---|
| Gene Length | 2349 bp |
|---|
| Protein Length | 782 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639795149 |
|---|
| Product | DnaB domain-containing protein |
|---|
| Protein accession | YP_941430 |
|---|
| Protein GI | 119871478 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase
[TIGR01443] intein C-terminal splicing region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.049604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0110505 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGTCG TGGACGACCG TGGTCATCCA GACATGGACG CTCCGCCGCC CAGCGAGGAT
TTCGGCCGCC AGCCTCCGCA CGATGCGGCT GCCGAACAGG CCGTCCTCGG CGGCATGCTG
TTGAGCAAGG ACGCCATCGC CGACGTGCTC GAGCGGCTGC GTCCCGGTGA CTTCTACCGG
CCGGCGCACC AGAACGTCTA CGACGCGGTC CTCGACCTGT ACGGCCGCGG TGAGCCCGCG
GACGCGGTGA CCGTGGCCGC CGAGTTGGAC CGGCGCGGGC TGCTGCGGCG GATCGGCGGG
GCGCCGTATC TGCACACCTT GATCTCGACC GTGCCGACCG CGGCCAACGC CGGGTTCTAC
GCGGGCATCG TGGCCGAGAA GGCGCTGCTG CGGCGGTTGG TCGAGGCGGG CACCCGCGTG
GTGCAGTACG GCTATGCGGG CGCCGACGGG GCGGATGTCG CCGATGTGGT CGACCGGGCG
CAGGCCGAGG TCTACGACGT GGTGGACCGG CGCTCGTCGG AGGACTTCGC GGTGCTGGAG
AGCCTGCTGC AGCCCACGAT GGACGAGATC GACGCCATCG CCTCGCAGGG CGGGATCGCC
CGCGGTGTGC CGACGGGTTT CACCGAACTA GACGAGCTGA CGAACGGTCT GCACTCGGGG
CAGATGGTCG TGATCGCGGC GCGGCCGGGT ATGGGCAAGG CGCTGGCGTT GGACACGCCG
CTGCCGACGC CGGACGGCTG GACCACCATG GGTGAGGTCG AGGTCGGTGA CGAGCTGATC
GGTGCCGACG GCCGGCCGAC GCGTGTGGTC GCGGCGACCG ACGTGATGGT GGGGCGGCCC
TGCTATGAAG TCGAGTTCTC CGACGGCACG GTCATCGTCG CGGACGCGCA GCATCAGTGG
CTGACGGATA CACGGGCGTC AGGCAGGTCC GCGCGGGTAG CGGCGGCGGT CCGCACGACC
GAGCAGATCG CCGCGACACT GCGGTGCCCG ACAGCCGACC GCAGGCTGAA CCATTCCGTG
GCCAACGCCG CGCCGCTGCA GGCGCCCACC CGAGAGCTCT TGGTGCCGCC GTACACGCTC
GGGGCCTGGC TCGGTGACGG TACCTCCGCA GCCGCGCAGA TCACGACTGC CGATCCCGAG
TTGGTGATGC GGATCGAGGC GGAAGGTGTT GAGTTTGGGA CGCTGCAGGG TCGCTTGCGC
ACAATCGGAG TCCTGGGCGA CAAGCACATT CCGATCGAGT ACCTCCGGGC GTCTGAGTCG
CAGCGCCGCG CCTTGCTCGC CGGCCTGCTG GACACAGACG GTACGGTTGC CGTGGGTGGC
GGGGTGCAGT TCAGCGTCAC GAACAAGCGC TTGGCGGCCG ACGTCGCGGA ACTCGTTGTC
AGCCTCGGGT ATCGGTGCCG ATCCACTACC AAGCACGTCA AAGGTCGCAG TGCGGATTCG
TCGGTCGCGT ACACGCTCAA CTTCTCGACC GACGACGACG TCTTCGGGTT GGCCCGCAAA
GCGATCCTGC ACAAGGAGCG TCGTGGCGCG TCGACTACCG TCCGCTCGGA TTCACGCTTC
ATCGTCGACG TGCGGCCCGT GCGCAGCGTT CCGGTGCGGT GCGTCGAGGT AAGCAACGAC
AGCCACATGT ACTTGGCGGG TCGGTCGATG GTGCCCACGC ACAATTCGAC GCTCGGACTG
GATTTCATGC GGTCGTGCTC GATCAAGCAT CAACTGCCGA GCGTGATCTT CTCTCTGGAG
ATGAGCAAGT CCGAGATCGT CATGCGCCTG CTGTCCGCGG AGGCGAAAAT CAAGCTGGCG
GATATGCGTT CGGGCCGGAT GAGTGACGAC GACTGGACGC GGTTGGCGCG GCGCATGAGT
GAGATCAGCG AGGCTCCGCT CTACATCGAC GACTCGCCGA ACCTGACAAT GATGGAGATC
CGGGCCAAGG CGCGACGGCT GCACCAGAAG GCCGGGCTGC GCCTGATCGT CATCGACTAC
CTACAGCTGA TGACGTCGGG CAAGAAGGTG GAGTCACGCC AGCAGGAAGT GTCGGAGTTC
TCGCGAAACA TGAAGCTGCT GGCCAAGGAA CTCGAGGTGC CGGTGATCGC GATGAGCCAG
CTGAACCGTG GACCCGAGCA GCGAACTGAC AAGAAGCCGA TGCTGTCGGA TCTGCGTGAG
TCGGGTGCCA TCGAGCAGGA CGCCGACATG GTGATCCTGC TGCATCGCCC CGATGCCTTC
GAACGTGACG ATCCGCGCGG TGGCGAGGCC GATCTCATTG TGGCCAAGCA CCGTAACGGT
CCGACGAAGA CGATCACCGT TGCGCACCAA CTGCATCTGT CGCGGTTCGC GAACATGGCC
CACGCGTAG
|
|---|
| Protein sequence | MAVVDDRGHP DMDAPPPSED FGRQPPHDAA AEQAVLGGML LSKDAIADVL ERLRPGDFYR
PAHQNVYDAV LDLYGRGEPA DAVTVAAELD RRGLLRRIGG APYLHTLIST VPTAANAGFY
AGIVAEKALL RRLVEAGTRV VQYGYAGADG ADVADVVDRA QAEVYDVVDR RSSEDFAVLE
SLLQPTMDEI DAIASQGGIA RGVPTGFTEL DELTNGLHSG QMVVIAARPG MGKALALDTP
LPTPDGWTTM GEVEVGDELI GADGRPTRVV AATDVMVGRP CYEVEFSDGT VIVADAQHQW
LTDTRASGRS ARVAAAVRTT EQIAATLRCP TADRRLNHSV ANAAPLQAPT RELLVPPYTL
GAWLGDGTSA AAQITTADPE LVMRIEAEGV EFGTLQGRLR TIGVLGDKHI PIEYLRASES
QRRALLAGLL DTDGTVAVGG GVQFSVTNKR LAADVAELVV SLGYRCRSTT KHVKGRSADS
SVAYTLNFST DDDVFGLARK AILHKERRGA STTVRSDSRF IVDVRPVRSV PVRCVEVSND
SHMYLAGRSM VPTHNSTLGL DFMRSCSIKH QLPSVIFSLE MSKSEIVMRL LSAEAKIKLA
DMRSGRMSDD DWTRLARRMS EISEAPLYID DSPNLTMMEI RAKARRLHQK AGLRLIVIDY
LQLMTSGKKV ESRQQEVSEF SRNMKLLAKE LEVPVIAMSQ LNRGPEQRTD KKPMLSDLRE
SGAIEQDADM VILLHRPDAF ERDDPRGGEA DLIVAKHRNG PTKTITVAHQ LHLSRFANMA
HA
|
|---|
| |