| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5005 |
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| Symbol | ligC |
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| ID | 4612684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. KMS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008705 |
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| Strand | - |
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| Start bp | 5245129 |
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| End bp | 5246190 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639794698 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_940984 |
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| Protein GI | 119871032 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.142668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCA TGGACCTACC CGTCATGCCG CCGCTGGAGC CGATGCTCGC CAAAGCCCAG
GCGAAGGTGC CGACCGAATC CGGCGTCTGG TCCTACGAAC CGAAATGGGA CGGCTTCCGC
GCACTGGTGT TCCGCGACGG TGACGACGTC GTGCTGATGT CCAGGAGCGG CAAGGACCTG
GCGCGGTACT TCCCCGAGGT GCTCGACTTC GTGCGCGACG AACTGGCCCC GCGCTGTGTG
CTCGACGGCG AGATCGTCGT CCCCCGTGAG ATCGGCGGTC GCACCCGGCT GGACTGGGAG
TCGCTGAGCC AGCGCATCCA TCCCGCCGAA TCGCGCGTGC GCAAGCTCTC CGAGGAGACC
CCCGCGCATT TCATCGGTTT CGACGCACTC GCCAGCGGTG ACACCTCGCT GATGAAGGAG
CCGTTCCGCG CCCGGCGTCA GGCGCTCATC GAGGCTGTCT CGCACAAGCA GTGGTGTCAT
GTCACGCGGA CCACGGAGGA CCCCGGGCTC GGTGCGCAGT GGCTCGAGGA GTTCGAGGGT
GCCGGTCTCG ACGGTGTGAT CGCCAAACGC CTCGACGGCT CGTACCTGCC GGGTAAGCGG
GAGATGGTCA AGGTCAAACA CGCCCGCGAC GCCGACTGCG TGGCCATCGG CTACCGGATC
CACAAGAGCG GGGAGGGGAT CGGCTCGCTG CTGCTCGGAC TGTACACCGA CGAGGGCGAC
CTCCAGATGG TCGGCGGGGC AGCGTCTTTC ACTGCCAAGG ACCGGCTCAA GCTGCTCGCC
GAACTCGAAC CGCTGCGTGA GGGGGACGAG GTGCGGGAGG GCGATCCGAG CCGTTGGAAC
TCCGCGGCGG ACAAGCGCTG GATACCGATC CGGCCGGAGC GGGTCGCGGA GGTGGCCTAT
GACCAGATGG AGGGAAACTC GGTGCAGGGG CGGAGATTCC GACATGCGGT CAAGTTCCGG
CGATGGCGGC CGGACCGCGA TCCGGCCAGT TGCACGTTCG ACCAACTGGA AGTTCCGCTG
ACCTACGACC TCTTCGACGT GTTGGAGACC CAGGATGGCT AG
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| Protein sequence | MDTMDLPVMP PLEPMLAKAQ AKVPTESGVW SYEPKWDGFR ALVFRDGDDV VLMSRSGKDL
ARYFPEVLDF VRDELAPRCV LDGEIVVPRE IGGRTRLDWE SLSQRIHPAE SRVRKLSEET
PAHFIGFDAL ASGDTSLMKE PFRARRQALI EAVSHKQWCH VTRTTEDPGL GAQWLEEFEG
AGLDGVIAKR LDGSYLPGKR EMVKVKHARD ADCVAIGYRI HKSGEGIGSL LLGLYTDEGD
LQMVGGAASF TAKDRLKLLA ELEPLREGDE VREGDPSRWN SAADKRWIPI RPERVAEVAY
DQMEGNSVQG RRFRHAVKFR RWRPDRDPAS CTFDQLEVPL TYDLFDVLET QDG
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