Gene Mkms_4311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_4311 
Symbol 
ID4612252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4530779 
End bp4531636 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content67% 
IMG OID639793995 
Productphage major capsid protein, HK97 
Protein accessionYP_940292 
Protein GI119870340 
COG category[R] General function prediction only 
COG ID[COG4653] Predicted phage phi-C31 gp36 major capsid-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.101318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.740598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCC TCAGCACATC TGCTGGCTCG ATCCTCAAGC CCGAAGAGGT CCACGACCTC 
ATCGTCCAGC CCACCCAGGA GCAGTCGGTC GCAATGCAGA CCGCCACCGT GGTGCCCACC
AGCAGCGCGG AGTTCCGGTT CCCCGTCGTC GTGGAAGATG CTGCAGCACA GTGGCTTTCG
GAGGGCGAAG AGATTCCCCT GACGGACCCG ACCGTCGATG AGGTGGTCGC CCGCCCCAAG
AAGATCGCCT CACTGACGAA GGTGAGTCGC GAACTGGCCG AGGACAGTTC GCCCGAAGCC
ACCGCGCTCG TCGGTGCGAG CGTCGCCCGC GACATGGCGA GGCGTATCGA CGCGGCCTGG
TTCGCGGCCT CGACGGCGAA GGGTCCGGCC GGTCTTGCCA GCCTGATCGG AACCGCCCAG
TCGGTCGCCG GTGGGGCGTA CACCAACCTC GACGCCCTCG CCGAGGCCCT CAGCCTGATC
GAGGATGTCG GCGGCAACCC GACCGCGTTC GTCTCGAATT CCTCGACGGT GCTGGCACTG
TCGAAGCTCA AGAAGACCAG CGACTCCAAC GAGCCGCTGC TGTCGCCGAA CCTCGCCACC
GGCGCGACAC AGCGCATCGA GCGCCAACTC CTCGGTGTGC GCCTGCACTC CACGCCGGAC
ACCAACCTCG AAGACGACGT GATCTGGGCC TACGACCAGT CGAAGGTCTT CGTGGTGCTG
CGCCGCGACG TGGACCTGGC CGTCGACCAG TCCGCATTTT TCACGAGTGA CAGCCTGGCT
GTCCGCTGCA CCATGCGGAT CGACTTCGCC TTCCCGCACC CGCAGAGCGT GGTGCGAGTC
GGGCCGGACG GCAGCTAG
 
Protein sequence
MAFLSTSAGS ILKPEEVHDL IVQPTQEQSV AMQTATVVPT SSAEFRFPVV VEDAAAQWLS 
EGEEIPLTDP TVDEVVARPK KIASLTKVSR ELAEDSSPEA TALVGASVAR DMARRIDAAW
FAASTAKGPA GLASLIGTAQ SVAGGAYTNL DALAEALSLI EDVGGNPTAF VSNSSTVLAL
SKLKKTSDSN EPLLSPNLAT GATQRIERQL LGVRLHSTPD TNLEDDVIWA YDQSKVFVVL
RRDVDLAVDQ SAFFTSDSLA VRCTMRIDFA FPHPQSVVRV GPDGS