| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_3807 |
|---|
| Symbol | |
|---|
| ID | 4611742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 4021384 |
|---|
| End bp | 4022034 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639793487 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_939790 |
|---|
| Protein GI | 119869838 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.225103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0640685 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGCC CCGCCACCCC GATGCCGACT GACCGTGGTC AGCGCCGTAC GTCGCTGCAG
CAGGAGCGGT CGCGGGAGAC CAAGCGGATG CTGGTGCAGG CCGCGATGGC GCTGTGGCGG
ACCAACGGGT ATGCGAACAC CACGGTCGCC GACATCTGCA CCGCGGCCGG GGTGTCGAAG
GCGTTGTTCT ACTTCTACTT CCCGCGCAAA GAGGACGTTC TGTTCGAAGT GGGTGTGATG
TCCACCCGCT CGGCGCGGCA GACCGCCGAT GCGCTGCTGG CCAAGCCCTA TGAGGTCCCG
GCGGTGATCG CAGCGGCACT GGCCGACCTC GAGAGGTCGA TGGCGCGCAA CCCACCGGAA
CTGGTCGTCG CGGCGATACT GGAGGGCTAC CGTCACGAGC ACCGGATCCT GGCCGGCGCC
GAAGCCGTCG AGGACGACGG TGGGATGTTC ACCGCACTGT TCGACCGCGC CCAGCGCGAC
GGCAAGTTGG CCCGGCACAT CGATGCCGGC CATCTGGCGT ATCTGGCGCA CACGCTGGTC
AGCGAGGGCG CCCGGCACTG GGCCGTCGGC GCGTTCGGCG ACCGGTCGTT CACCGAGGTG
GTGGGCGCCG ACATCGACGC TTTGATCGCG GGTCTGAGCC GCGAACCCTG A
|
|---|
| Protein sequence | MPRPATPMPT DRGQRRTSLQ QERSRETKRM LVQAAMALWR TNGYANTTVA DICTAAGVSK
ALFYFYFPRK EDVLFEVGVM STRSARQTAD ALLAKPYEVP AVIAAALADL ERSMARNPPE
LVVAAILEGY RHEHRILAGA EAVEDDGGMF TALFDRAQRD GKLARHIDAG HLAYLAHTLV
SEGARHWAVG AFGDRSFTEV VGADIDALIA GLSREP
|
|---|
| |