Gene Mkms_3518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3518 
Symbol 
ID4611448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3694092 
End bp3694625 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content65% 
IMG OID639793194 
Productputative metalloprotease 
Protein accessionYP_939502 
Protein GI119869550 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.580831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCG AGGTGTCCAA CGAATCGGGC ATCGACGTCT CCGAGGAGGA GTTGATCAGC 
GTCGCCCGGT TCGTCATCGA GAAGATGAAC GTCAACCCGG CCGCCGAACT GTCGATGGTC
CTGCTCGACA CGTCGTCGAT GGCCGATCTG CACATGCGCT GGATGGATCT GCCCGGCCCG
ACCGACGTGA TGAGCTTCCC GATGGACGAG CTCGAACCCG GCGGCCGCCC CGATGCGCCC
GAACCGGGTC CCGCCATGCT CGGCGACATC GTGCTGTGCC CCGAATTCGC CGCGAAACAG
GCGGAGACGG CGGGCCATTC GCTGGGCCAC GAACTGGCGC TGCTGACGGT GCACGGCGTC
CTGCACCTGC TGGGCTACGA CCACGCCGAA CCCGACGAGG AGAAAGAGAT GTTCGCGTTG
CAGCGTGAAC TGCTCGAGGA GTGGGTGGCC CATCAGGTCG AGGCGTATCA CCTCGACCGT
CAGACCGAGC GAGACCGGCG GCTGCTCGAC AAGTCCCGGT ACTTCGACGA ATGA
 
Protein sequence
MSIEVSNESG IDVSEEELIS VARFVIEKMN VNPAAELSMV LLDTSSMADL HMRWMDLPGP 
TDVMSFPMDE LEPGGRPDAP EPGPAMLGDI VLCPEFAAKQ AETAGHSLGH ELALLTVHGV
LHLLGYDHAE PDEEKEMFAL QRELLEEWVA HQVEAYHLDR QTERDRRLLD KSRYFDE