Gene Mkms_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3288 
Symbol 
ID4611214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3445942 
End bp3446514 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content61% 
IMG OID639792961 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_939272 
Protein GI119869320 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.93763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.56019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAC GCGTACCGAT GCTCGACCGT GAGCAGGCCC AGCTGCGAGC TGCCGAATGT 
GGGTTGCCCG AAGAGTTGGC AGACCTGTCG GTATTCCGCG TGGCACTTCA TCAGCCGCGT
GTGGCGGTTG CGCTGTATGG GCTGCTAGAC GCGTTACTCT TCCGCGGTTC CCTTGACGCG
CGGCTACGCG AGCTGGTCAT CATGCGCATC GGCTGGATTA CTGGCTCCGA ATACGAATGG
ACTCAACATT GGCGAATCGC CACACTGCTC GGCGTGCCTG AGCATGATCT CCTGGCGGTG
CGCGACTGGC AGAATTCCGA AAGCCTCGGG CCAGTCGAGC GTGCGGTCCT CGCAGCGACC
GATGATGTGG TACGCGACGG GGTCATCTCC GAGGAAAACT GGGCTGGGTG CCAGAAGGCA
TTCAATAGCG ATCACGCCGT TTTGGTCGAA CTTGTCGGAG CAATCGCCAA TTGGCGGCTC
TTTTCGATCC TGCTTCGATC TCTGAATATT CCGCTTGAGT CCGGTACCGA CGGCTGGCCG
CCCGATGGGC GAGCTCCTCA GGGTTGCGAT TGA
 
Protein sequence
MAERVPMLDR EQAQLRAAEC GLPEELADLS VFRVALHQPR VAVALYGLLD ALLFRGSLDA 
RLRELVIMRI GWITGSEYEW TQHWRIATLL GVPEHDLLAV RDWQNSESLG PVERAVLAAT
DDVVRDGVIS EENWAGCQKA FNSDHAVLVE LVGAIANWRL FSILLRSLNI PLESGTDGWP
PDGRAPQGCD