Gene Mkms_3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3228 
Symbol 
ID4611153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3386041 
End bp3387540 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content62% 
IMG OID639792900 
Productputative plasmid replication initiator protein 
Protein accessionYP_939212 
Protein GI119869260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00604715 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGG CGCAGCTTGC CCTGCCGGGT GTTCCGGATA CAGTTGATAC CACCCGAGTG 
GTCGAGCAGA TGGTGCGCCG GGCCGCGTCG ATGGGATACC AATCCTGGTG GCGACGAGCA
GAATCCGTCG GATTCTGCGC TCACCCCATC CAGCTGATCG GTACCGATGA GTACGGGCGT
CAGCGGGTGG TGTGGACGCG GTGCAACAAC CGTCGCGCCC ACATTTGCCC GTCGTGTTCA
GATCTCTACG CCCGCGACAC CTGGCAACTC GTGCACGCCG GCGCTGCGGG AGGCCACCAC
GGCATGCCCA CCGCGGTGGG CGATCATCCG CAAGTTTTCC TCACCCTGAC TGCCCCCAGC
TTCGGGGCCG TCCACACCGC CACGACGTCG GGGGACAAGA AAGCGCAGGT ATGCCGAGAC
CAGCACCGGA TCGGCGGCTA CCGCCGCTGC CCGCATGGAA AACAATTGTG GTGCAGCATG
TCCCATGATC ATGGCGACGA GCGGGTCGGT CAGCCGCTCT GTCCGGAGTG CTACGACTAT
GCCGGGCATG TCCTGTTCGC CTGGCATCTT CCCGAACTGT GGCGACGCTT CACCATCACC
ATGCGGCGCA CCCTCCGCAA AGAACTGAAA GCCACCGGTG TGGATCCGGA TGCGGTGCGG
GTGAGCTTCA TCAAAATCGT CGAACTGCAA GCCCGCGCCA TCCCACACAT CCACGCCCTG
ATCCGCCTGG ACCCCCAAGA CGACCCCGAT CAGACCGATT GGGAATCACC CATCGGTGCA
GTCGAACTCG CCACCATCAT CCAACACGCC GCCCGCACCG TCACGCTCAC CATCGACGAT
CCGACCGCTG ATACCGATGC GCGGACGATG CGTTTCGGCA CACAGATCGA CACCCAACCC
CTCGCCGCAT CCGCAAAACC AGTGAAAAGT GCTCCACCAG AACCAGAACC AGAACCAGGG
TCAGGCTCAG GACGGTCCAT GTCTGGCCGG CTGGTGGCAC GCTATCTCGC CAAGTATGTC
ACCAAATCCT TGGTAGACCT CGGAATCAGC GCGCGCCGCC TATCTACGGA AGCCATACCC
GACCTGGACG TGTCAGAGCA TGTGCGGACC ATCCTGACCA CCATCAGCGA TCTCGCGGAC
AAAGGACTGT CCGGCATCGG GCGGTGGTTG CACACCCTCG GATTCCGCGG CCACATCACC
AGCAAATCCC GCCGTTATTC CACTACCATG ACCGTGCTGC GCGAACAGCG CGCCATTTGG
ACGCGTGAAG AACGCTTGAA AAGCACTGCA TACCAATACG ATCCCAACTG TGACTTCGCC
GGTCGCGATG ATCTGGTGGC GTGGGAGTTC GAACGTGCCG GCCTCGGCAG CCTCGGCGAT
CGCAGTCTCG TCTATTCCGC GGCCCTCCAA CGCATCCACT CCCGCCTCAT CGGACTGGTA
GAAGCACGTC GCCAAGCCCA CAACGAACAA TGGGATCCGC TAGGGGCAAG CGATGGCTGA
 
Protein sequence
MTSAQLALPG VPDTVDTTRV VEQMVRRAAS MGYQSWWRRA ESVGFCAHPI QLIGTDEYGR 
QRVVWTRCNN RRAHICPSCS DLYARDTWQL VHAGAAGGHH GMPTAVGDHP QVFLTLTAPS
FGAVHTATTS GDKKAQVCRD QHRIGGYRRC PHGKQLWCSM SHDHGDERVG QPLCPECYDY
AGHVLFAWHL PELWRRFTIT MRRTLRKELK ATGVDPDAVR VSFIKIVELQ ARAIPHIHAL
IRLDPQDDPD QTDWESPIGA VELATIIQHA ARTVTLTIDD PTADTDARTM RFGTQIDTQP
LAASAKPVKS APPEPEPEPG SGSGRSMSGR LVARYLAKYV TKSLVDLGIS ARRLSTEAIP
DLDVSEHVRT ILTTISDLAD KGLSGIGRWL HTLGFRGHIT SKSRRYSTTM TVLREQRAIW
TREERLKSTA YQYDPNCDFA GRDDLVAWEF ERAGLGSLGD RSLVYSAALQ RIHSRLIGLV
EARRQAHNEQ WDPLGASDG