Gene Mkms_3210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3210 
Symbol 
ID4611134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3366004 
End bp3366690 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content69% 
IMG OID639792881 
ProductHAD family hydrolase 
Protein accessionYP_939194 
Protein GI119869242 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.742759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.278604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCGG TGCTGTGGGA CATGGATGGA ACGCTCGTCG ACTCCGAAAA GCTCTGGGAC 
GTCTCGCTTG CCGCGCTCTA CGACCGGCTC GGCGGGGTGA TCACCGACGA GTTGCGCACC
GCCCTGGTCG GCAGTTCCGC GGAGAACACC ATCAAGACGA TCTTCGCCGA CCTCGGCCTC
GAACCCGACC CCGCGGCGAT GGCCGAGGCC GACAGATGGC TGCACGATCA CACCGGCGAC
CTGTTCGCCA CCCACGGTCT GCCGTGGTGC GACGGCGCCC GCGAACTGCT GGAAGCCCTT
GCGGGCGAAG GTGTTCCGAT GGCATTGGTC ACCAACACCC AGCGCGCGCT GACCGAGCAG
GCGCTCGACA GCATCGGCCG CCACTTCTTC TCGGTGACCG TCTGTGGTGA CGAGGTGCCC
AACGGCAAAC CCGAACCGGA CCCCTACCGC CGCGCCGCCG CACTGCTCGA CCTCGACCCC
GGTCACTGCT TGGCGGTGGA GGATTCGGTC ACCGGCACTC TCGCCGCCGA ACTCGCCGGG
TGCCCGGTCC TCGTGGTCCC CAACGACGTC GTCGTCCCAC CGAGCCCGCG CCGCAGGCAC
GTCGACTCGC TGCGCGACGT GGCCGTCGAC GACCTGCGCG CATTCCACGC CGAGATCGCC
GCCGCCTCCG GTAAACGCAG CGCCTGA
 
Protein sequence
MRAVLWDMDG TLVDSEKLWD VSLAALYDRL GGVITDELRT ALVGSSAENT IKTIFADLGL 
EPDPAAMAEA DRWLHDHTGD LFATHGLPWC DGARELLEAL AGEGVPMALV TNTQRALTEQ
ALDSIGRHFF SVTVCGDEVP NGKPEPDPYR RAAALLDLDP GHCLAVEDSV TGTLAAELAG
CPVLVVPNDV VVPPSPRRRH VDSLRDVAVD DLRAFHAEIA AASGKRSA