Gene Mkms_3027 details

Gene Information

• Locus tag: Mkms_3027
• Symbol: lysS
• ID: 4610860
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. KMS
• Kingdom: Bacteria
• Replicon accession: NC_008705
• Strand: +
• Start bp: 3165549
• End bp: 3168887
• Gene Length: 3339 bp
• Protein Length: 1112 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639792696
• Product: lysyl-tRNA synthetase
• Protein accession: YP_939011
• Protein GI: 119869059
• COG category: [J] Translation, ribosomal structure and biogenesis; [S] Function unknown
• COG ID: [COG1190] Lysyl-tRNA synthetase (class II); [COG2898] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGCTCA CCAGTCCGCC GAGGACTCGC GCCGACTCCC GCTACTCCTG GGTTCCCGCG 
GCCGCCGGAT GGACCGTCGG CGTCATCGCC ACCCTATCGC TCATCGCGAG CGTCTCGCCG 
CTGGTCCGGT GGATCATCCG GGTGCCGCGA GAGTTCGTCG ACGACTACAT CTTCAACTTC 
CCCGACACCA GCTTCGCCTG GGCGTTCGTG CTGGCGCTGC TGGCGGGCGC GCTGGCCGCC 
CGCAAACGCA TCGCCTGGTG GATTCTGCTG CTGTACATGG TGGCCGCGGC CGGCTGGAAC 
GTCGCCGATC TGCTGACCGG TGACGAATCG GTCGTCGACG AGATGGGCGA GGTCATCGGC 
CTCGCCTTCC ACCTTGCAGC CGTGGCCTTC CTGTTGTTGG CCCGCCCGCT GTTCTGGGCC 
CGCGTGCGGC GCGGCGCCCT GTTCAAGGCG GCCGGTGTGC TGGCCGCCGG AATGGCGGTC 
GGCGTGCTCG TCGGCTGGGG GCTGCTCGAA CTGTTCCCCG GCGACCTCGA ACGCGACTAC 
CGGTTGGCAT ACGCGGCGAA CCGGGTGTTC GCGTTCGCCG GAGTGGACCC CGACGCGTTC 
GACGGACAAC ACCCACACGT GGTCGTCAAC GCGCTGCTCG GGTTGTTCGG CGCGCTGGCG 
CTGATGGCCG CGGCGATCGT GCTGTTCCAG TCGCAGCGTT CGGAGAACGC GCTCACCGGC 
GAAGACGAAT CGGCCATCCG CGGTCTGCTC GAGCTCTACG GCAAGAACGA CTCGCTGGGC 
TACTTCGCCA CCCGGCGGGA CAAGTCCGTG GTGTTCGCAC CGAACGGACG TGCCGCGATC 
ACCTACCGGG TCGAAGTGGG GGTCTGCCTG GCCAGCGGTG ACCCGGTCGG CGACCCGAAG 
GCCTGGCCGC AGGCGATCGA CGCGTGGCTG GCGCTGTGCG GGACGTACGG CTGGGCACCG 
GGCGTCATGG GTGCCAGCGT GGGCGGGGCC GAGGCGTTCC GGGCGGCCGG ACTCAGCGCG 
ATCCAACTGG GCGACGAGGC CATCCTGCTT CCGGACAGCT TCCGGCTCTC CGGGCCGGAC 
ATGCGGGCTG TGCGCCAGGC CGTCACGCGG GCCCGCCGCG CCGGGGTGAC CGTGCGGATC 
CGCAGACACC GCGAGCTCTC ACCCGAACAG ATGGCCGAGG TGATCGCCCA CGCCGACGCG 
TGGCGCGACA CGGAGACAGA ACGCGGCTTC TCGATGGCGC TCGGCCGCCT CGGCGATCCC 
GCCGACAGCG ACTGTCTGCT GGTGGAGGCC GTCCAGGGCG GGAACGGCGG GCAGGAGCGA 
AGCGACCCGG GGGATGGCAC TGTCGTGGCC ATGCTGTCGT TGGTTCCGTG GGGCAGCAAC 
GGCGCCTCCC TCGACGTGAT GCGGCGTTCC CCGCAGTCAC CCAACGGCAC CATCGAGTTG 
ATGGTCAGCG AGCTGTGCAT GCAGGCCGAG GACATCGGCG TCACCCGCAT CTCCCTGAAC 
TTCGCGATGT TCCGGTCGGC GTTCGAGCAG GGCGCGCAAC TCGGCGCCGG ACCCGTGGCC 
CGGCTGTGGC GCTGGCTGCT GGTCTTCTTC TCCCGGTGGT GGCAGCTGGA GACGCTGTAC 
CGCTCGAACA TGAAATACCA ACCGCAGTGG GTGCCGCGCT ACGCGTGCTA CGAGGATGCG 
CGCCTCATCC CCCGCGTCGG GGTGGCGTCG GTGATCGCCG AGGGCTTCCT GGTGCTGCCG 
TTCTCGCGGC GCAACAAACA ACACACCGGC CACCACACGT CCGCACCGCA GGACCTGGTC 
GCCAGCGGCG TGCTCCACCA CGACGGCACC GCACCCGACA TGTCCGGGTT GCGCACCGAC 
ACCGCCGACG ACGAACCGCC CCGGTTGCCC GAGCAGGTGC GGGTCCGGAT GGCGAAACTC 
AAGGCGCTGC AGGCCGACGG CGTCGACGCC TATCCGGTCG GTCGGCCACC GAGCCACACC 
GCGGCGGCTG CCGTCGACTC CCCCGACGAC GTCGAACTCG ATGTCGCCGG CCGGGTGCTG 
CGCATCCGCG ACTACGGCGG TGTGCTGTTC GCCCAGTTAC GGGACTGGTC GGGTGAAGTG 
CAACTGCTGC TGGACAATTC GACACTCGAG CAGGGCAGCA CCGCCGACTT CACCGCGGCC 
ATCGACCTCG GCGACCTCAT CGCGGCGACC GGCACCATGG GCTACAGCAA GAATGGGACC 
CGCTCGCTGC TGGTGCGGCA CTGGCGACTC ACCGGTAAAT GCCTGCGTCC CCTGCCGGAC 
AAGTGGAAGG GCCTGACCGA TCAGGAGGCC CGCGTCCGGG CCCGCTACGT CGACCTGGCG 
GTCAACACCG AGGCGCGGGA TCTGATCCGG GCCCGCAGCG GCGTGCTGCA CGCGATCCGG 
GACACGCTGT ACCACAAGGG TTTTCTCGAG GTCGAGACCC CGATCCTGCA GCAGATCCAC 
GGCGGCGCCA ACGCACGGCC GTTCCTGACC CACATCAACG CCTACGACCT GGACCTGTAT 
CTGCGCATCG CGCCCGAGCT GTATCTCAAG CGGCTCTGCG TCGGTGGAGT GGAGCGAGTC 
TTCGAACTCG GCCGCGCGTT CCGCAACGAA GGCGTCGACT TCTCTCACAA CCCCGAATTC 
ACACTGCTGG AGGCGTATCA GGCGCACGCC GACTACCACG TGTGGATCGA CGGGTGCCGT 
GAACTCATCC AGAACGCCGC GATGGCCGCC AACGGTGAGC ACGTGTTCCT CCGCCCGCGT 
GACGACGGCG TCCTCGAACC CGTCGACATC TCCGGACCGT GGACCGTCAA GACCGTCCAC 
GAGGCGGTGT CCGAGGCGCT GGGCGAACAC ATCGACGCCG CCACGGAACT GCCGACGCTG 
CGCAAGCTGG CCGACGCGGC GGGCATCCCC TACCTGACCC ACTGGGACGA GGGGGCGGTG 
GTGCTCGAGA TGTACGAACA CCTGGTCGAG GACCGCACCC AGAAGCCGAC CTTCTACAAG 
GACTTCCCGA CGTCCGTATC CCCCCTGACG CGCCCGCACC GCAGCATTGC CGGCGTCGCC 
GAGCGGTGGG ACCTCGTCGC CTGGGGTGTC GAATTGGGCA CCGCCTACAG CGAACTCACC 
GATCCGGTGG AGCAGCGTCG TCGACTGCAG GCGCAGTCGC TGCTCGCCGC GGGCGGTGAT 
CCCGAGGCGA TGGAACTCGA CGAGGACTTC CTCCAGGCCA TGGAGTACGC GATGCCGCCC 
ACCGGTGGGC TGGGCATGGG TGTCGATCGG GTGGTCATGC TGATCACCGG CCGCAGCATC 
CGGGAGACGC TCCCGTTCCC GTTGGCCAGA CCACGTTGA 

 

Protein sequence

MTLTSPPRTR ADSRYSWVPA AAGWTVGVIA TLSLIASVSP LVRWIIRVPR EFVDDYIFNF 
PDTSFAWAFV LALLAGALAA RKRIAWWILL LYMVAAAGWN VADLLTGDES VVDEMGEVIG 
LAFHLAAVAF LLLARPLFWA RVRRGALFKA AGVLAAGMAV GVLVGWGLLE LFPGDLERDY 
RLAYAANRVF AFAGVDPDAF DGQHPHVVVN ALLGLFGALA LMAAAIVLFQ SQRSENALTG 
EDESAIRGLL ELYGKNDSLG YFATRRDKSV VFAPNGRAAI TYRVEVGVCL ASGDPVGDPK 
AWPQAIDAWL ALCGTYGWAP GVMGASVGGA EAFRAAGLSA IQLGDEAILL PDSFRLSGPD 
MRAVRQAVTR ARRAGVTVRI RRHRELSPEQ MAEVIAHADA WRDTETERGF SMALGRLGDP 
ADSDCLLVEA VQGGNGGQER SDPGDGTVVA MLSLVPWGSN GASLDVMRRS PQSPNGTIEL 
MVSELCMQAE DIGVTRISLN FAMFRSAFEQ GAQLGAGPVA RLWRWLLVFF SRWWQLETLY 
RSNMKYQPQW VPRYACYEDA RLIPRVGVAS VIAEGFLVLP FSRRNKQHTG HHTSAPQDLV 
ASGVLHHDGT APDMSGLRTD TADDEPPRLP EQVRVRMAKL KALQADGVDA YPVGRPPSHT 
AAAAVDSPDD VELDVAGRVL RIRDYGGVLF AQLRDWSGEV QLLLDNSTLE QGSTADFTAA 
IDLGDLIAAT GTMGYSKNGT RSLLVRHWRL TGKCLRPLPD KWKGLTDQEA RVRARYVDLA 
VNTEARDLIR ARSGVLHAIR DTLYHKGFLE VETPILQQIH GGANARPFLT HINAYDLDLY 
LRIAPELYLK RLCVGGVERV FELGRAFRNE GVDFSHNPEF TLLEAYQAHA DYHVWIDGCR 
ELIQNAAMAA NGEHVFLRPR DDGVLEPVDI SGPWTVKTVH EAVSEALGEH IDAATELPTL 
RKLADAAGIP YLTHWDEGAV VLEMYEHLVE DRTQKPTFYK DFPTSVSPLT RPHRSIAGVA 
ERWDLVAWGV ELGTAYSELT DPVEQRRRLQ AQSLLAAGGD PEAMELDEDF LQAMEYAMPP 
TGGLGMGVDR VVMLITGRSI RETLPFPLAR PR