Gene Mkms_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3025 
Symbol 
ID4610858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3164302 
End bp3165018 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content65% 
IMG OID639792694 
Producttranslation initiation factor 3 
Protein accessionYP_939009 
Protein GI119869057 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.335133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTTGG CACGGGCGGC GGAAGCCGTG ATCGGTCGGC AACGGGCCCT GCAGTGCAGG 
GCCTTCCTGC TCTCGCGGGC AGGTGCGGAA TGGGCCAGTG GACTCCCTGG AGAACACAAC
ATAGGAGGCC CCATCAGCAC TGAGACCCGC GTCAACGAGC GCATCCGCGT ACCTGAAGTT
CGCCTGATCG GACCGGGCGG TGAACAGGTA GGCATCGTGC GCATCGAAGA TGCACTCCGC
GTCGCCGCGG ATGCCGATCT CGATCTCGTC GAAGTTGCAC CGGACGCCAA GCCGCCCGTC
TGCAAGATCA TGGACTACGG AAAGTTCAAG TACGAGACGG CACAGAAGGC GCGCGAGTCT
CGCAAGAACC AGCAGCAGAC CGTCGTCAAG GAACAGAAGC TCCGTCCCAA GATCGACCCG
CACGATTACG AGACCAAGAA GGGTCACGTC ATCCGCTTCC TCGAGGCCGG GTCCAAGGTC
AAGGTGACGA TCATGTTCCG CGGACGTGAG CAGTCGCGGC CCGAACTGGG CTTCCGACTC
CTGCAGCGCC TGGGCGCCGA CGTGGCCGAG TACGGCTTCG TCGAGACGTC CGCGAAGCAG
GACGGACGCA ACATGACGAT GGTGCTGGCC CCGCATCGCG GCGCGAAGAC TCGCGCCAAA
GCGGCGGAGC AAGCAGAACG TCCCCGCGAG TCGGCCCCCG GCCCGGACGC CACGTAG
 
Protein sequence
MLLARAAEAV IGRQRALQCR AFLLSRAGAE WASGLPGEHN IGGPISTETR VNERIRVPEV 
RLIGPGGEQV GIVRIEDALR VAADADLDLV EVAPDAKPPV CKIMDYGKFK YETAQKARES
RKNQQQTVVK EQKLRPKIDP HDYETKKGHV IRFLEAGSKV KVTIMFRGRE QSRPELGFRL
LQRLGADVAE YGFVETSAKQ DGRNMTMVLA PHRGAKTRAK AAEQAERPRE SAPGPDAT