Gene Mkms_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2938 
Symbol 
ID4610767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3074284 
End bp3075759 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content71% 
IMG OID639792603 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_938922 
Protein GI119868970 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00848916 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTGC ACGACCTCGT GACGTCGGCC GCCGCCGCGG ATCCGGACCG CCCGGCGGTC 
ATCGGACCCG ACGGCGCCGC GACCTCGTTC GCACAGTTCG ACCGGCAGAT CCGGTCGGTC
GCCGGATGGG TCGCGACCCA CAGCGAACCG GGTGACCGGA TCGCGGTCAT CGCCGACAAC
AGCACTGCCT ACGCCCGGCT GTACTACGCG GTGCCACGCG CCGGCCGGGT GCTGACGCTG
GTCAACCAGC GCCTGCGGGC CGACGAGCAG TACACCCAGC TGGCGCTCAC CGAACCCACC
GTCGTCATCG GCGACCAGAC CTACGTGGAC GCACTGACCG AGCTGCGGTC CCAGGTCCCG
TCGGTGCGCC ACGTGATTGC GGCCGGATCT CCGGAGCTCA CGGCCGAACC GGGCGAGCCC
GGCGTCGACG TCGCGTGCGC ACCCGAGGAC CCCGCCTGGC TGCTGTTCAC CAGCGGATCG
ACCGGCACTC CTAAAGGCGT TGTGCACAGC CACCGTTCGA TACTCGCCGC CGTGCAAGGT
TCGGTCATCG GCCGCGCCGT CCCCCGCGGC GGGGTGTACC TGTTGCCGTT TCCGATGTGC
CACATCGCCG GCTACAACAT GCTGGTGCAG CACGCCGTCG CCGCCACCGT GGTGCTCGCG
GCGCAGTTCC GGGCCGACGC GATCGCGCGC ACCATCAACG ACTGCGCGGT GACCGCCTGT
TCACTGGCTC CGACGATGCT GCATGCACTG CTCGACCACC TGCGGGCCAC CGGTGCCACG
CTGCCGACCC TGCGGTCGAT CGCCTACGGG TCCGCCGCGA TCCCGGCCGA GCTCCTGCGC
ACCGCACTCG AACGCCTCGA CGTCGACTTC CATCAGGGTT ACGGCATGAC CGAGACCGGC
GGGAACGTCA CCTTCCTCGG CCCCGGCGAC CACCGGCGCG GCCTCGCCGG GCACCCCGCG
ATCCTGGCCG GCGCCGGCCG ACCCCATCCG CATGTCGAGG TCCGGATCGG CGACGACGGT
GAGATCCTGG TCCGCGGCCC CCAGGTTGCC ACCAGCTACT GGCGCGGGCG TTCTGCGGTG
GACGGTGAAG GGTGGCTGGC CACCGGTGAC ATCGGCCGCA TCGACGCGGA CGGCAACCTG
TACGTGGTGG ACCGCCGCAG GGACATCGTG GTCACGGGTG GGGAGAACGT GTCCTCCCGC
GAAGTGGAGG ACGTCCTGAC CGACCACCCG GAAGTGGAGT CGGCCGCCGT GGTCGGCGTG
CCGGACGAAT ACTGGGGTGA AGCGGTGTGC GCGGTCGTCG TGGCGGCCGA GGGTCGACAC
CCCACCGAGT CGGCGCTGAT CGAGCACGTG CGGGCGCGGC TCACCGGGTT CAAGCGCCCC
CGCCATGTGC TGTTCGTCGA CGCCTTGCCG CTGACGACGA ACGGCAAGAT CGACAAGAAC
CGGGTCCGCC GGCTCGCCCG TTCCGCGCTG ACCTGA
 
Protein sequence
MLLHDLVTSA AAADPDRPAV IGPDGAATSF AQFDRQIRSV AGWVATHSEP GDRIAVIADN 
STAYARLYYA VPRAGRVLTL VNQRLRADEQ YTQLALTEPT VVIGDQTYVD ALTELRSQVP
SVRHVIAAGS PELTAEPGEP GVDVACAPED PAWLLFTSGS TGTPKGVVHS HRSILAAVQG
SVIGRAVPRG GVYLLPFPMC HIAGYNMLVQ HAVAATVVLA AQFRADAIAR TINDCAVTAC
SLAPTMLHAL LDHLRATGAT LPTLRSIAYG SAAIPAELLR TALERLDVDF HQGYGMTETG
GNVTFLGPGD HRRGLAGHPA ILAGAGRPHP HVEVRIGDDG EILVRGPQVA TSYWRGRSAV
DGEGWLATGD IGRIDADGNL YVVDRRRDIV VTGGENVSSR EVEDVLTDHP EVESAAVVGV
PDEYWGEAVC AVVVAAEGRH PTESALIEHV RARLTGFKRP RHVLFVDALP LTTNGKIDKN
RVRRLARSAL T