Gene Mkms_2824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2824 
Symbol 
ID4611013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2943532 
End bp2944587 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content66% 
IMG OID639792489 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_938808 
Protein GI119868856 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0298901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGA CAACGAAGTT CGGTGCGATC GCCGCCGCCG GGGTGCTGGG CCTCGGGCTG 
ACGGCCTGCG GCGCCGGTGA CACCGAAGCC AACAGCGACA CCACCCGCAT CGGCGTCACG
GTGTACGACA TGAGCTCGTT CATCACCGAG GGCAAAGAGG GGATGGACAC CTACGCCAAG
GCCAAGAACA TCGAACTGGT GTGGAACTCG GCCAACAACG ACGTCTCCAC CCAGGCCAGC
CAGGTCGACT CGCTGATCAA CCAGGGGGTC GACGCGATCA TCGTCGTTCC CGTGCAGGCG
GATTCGCTCG GACCCCAGGT CGCCTCGGCC AAGGAGAAGG GCATCCCGCT GCTGGCGGTC
AACGCCGCGC TGGAGACGCC GGATCTGGCG GGCAACGTCC AGCCCGACGA TGTGGCCGCC
GGTGAGCAGG AGATGCAGAT GATGGCCGAC CGCCTCGGCG GCCGCGGCAA CATCGTCGTC
CTGCAGGGTC CGCTGGGCGG GTCCGGTGAG ATCAACCGCG GTAAGGGCAT CGACAACGTG
CTCGCCAAGT ACCCCGACAT CAAGGTGCTG GCCAAGGACA CCGCGAACTG GAAGCGCGAC
GAGGCCGTCA ACAAGATGAA GAACTGGATC TCGAGCTTCG GCCCGCAGAT CAACGGCGTG
GTGGCCCAGA ACGACGATAT GGGCCTCGGT GCCCTGCAGG CGCTCAAGGA GGCCGGCCGC
ACCGACGTCC CGATCGTCGG CATCGACGGA ATCGAGGACG GCCTCAACGC CGTGAAGAGC
GGTGAATTCA TCGGCACCTC ACTGCAGAAC GGCACCGTCG AACTGTCCGC CGGCCTGGCC
GTCGCCGACG CCCTGGTCAA GGGTGAGGAC GTCAAGACCG ATCCGGTCTA CGTCATGCCC
GCGATCACCA AGGACAACGT CGACGTCGCG ATCCAGCACG TGGTGACCGA ACGCGGCAAG
TTCCTCGAGG GGCTGGTCGA GTTGACCGAG AAGAACCTCG AGACCGGCGA CATCGCCTAC
GAGGGCATCC CGGGCCAGGA GCAGCCGCAG CCCTGA
 
Protein sequence
MTLTTKFGAI AAAGVLGLGL TACGAGDTEA NSDTTRIGVT VYDMSSFITE GKEGMDTYAK 
AKNIELVWNS ANNDVSTQAS QVDSLINQGV DAIIVVPVQA DSLGPQVASA KEKGIPLLAV
NAALETPDLA GNVQPDDVAA GEQEMQMMAD RLGGRGNIVV LQGPLGGSGE INRGKGIDNV
LAKYPDIKVL AKDTANWKRD EAVNKMKNWI SSFGPQINGV VAQNDDMGLG ALQALKEAGR
TDVPIVGIDG IEDGLNAVKS GEFIGTSLQN GTVELSAGLA VADALVKGED VKTDPVYVMP
AITKDNVDVA IQHVVTERGK FLEGLVELTE KNLETGDIAY EGIPGQEQPQ P