Gene Mkms_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2521 
Symbol 
ID4616081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2649676 
End bp2652432 
Gene Length2757 bp 
Protein Length918 aa 
Translation table11 
GC content70% 
IMG OID639792189 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_938508 
Protein GI119868556 
COG category[L] Replication, recombination and repair 
COG ID[COG4581] Superfamily II RNA helicase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.120154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATC CACCTGACAC GCAACTCGCC GCATTCGCGG CGGGGATGCC GTTCGCGCTC 
GACCCGTTCC AGATCCGCGC CTGCGAGGCG CTCGAGAGCG GTCACGGTGT CCTGGTGTGC
GCGCCCACCG GCGCCGGCAA GACCGTCGTC GGTGAGTTCG CCGTGCACCT CGCGCTGGCC
GCCGGCGGCA AGTGCTTCTA CACCACGCCG ATCAAGGCGT TGAGCAACCA GAAACACGCC
GACCTGGTCC GCCGCTACGG TCCCGAGAAG ATCGGGCTGC TCACCGGGGA CCAGTCCATC
AACGGTGACG CCGACATCGT CGTGATGACC ACCGAAGTGC TCCGCAACAT GCTCTACGCG
GATTCGCCCG CACTGCACGG ACTGTCGCAC GTGGTGATGG ACGAGGTGCA TTTCCTCGCC
GACCGGATGC GCGGTGCGGT GTGGGAAGAA GTGATCCTGC ACCTGCCCGA CGAGGTCAGG
CTGGTCAGCC TGTCGGCGAC CGTGAGCAAC GCCGAGGAAT TCGGCGGCTG GATCCAGACG
GTGCGCGGCG ACACCACCGT GGTGGTCGAC GAGCACCGGC CGGTTCCGCT CTGGCAGCAC
GTCCTGGTCG GCAAGCGATT GTTCGACCTG TTCGACTACC GCGCGCACAG CCCGGCCCGC
AGCGGACGCG AACTCGTCGT CGACCCGGAA CTGCTGCGCC ACATCGCCCA CCGGCGCGAA
GCCGACCGCC TCGCCGACTG GCAGCCGCGC GGCCGGGGCC GCTCGGCGCA CCGCAGCCGG
CCCACGATCT ACCGGCCGCC CGCCCGGCCC GACGTGATCG CCGCCCTGGA CCGTGAGGGA
CTGCTGCCGG CCATCACGTT CGTGTTCTCC CGCGCCGGCT GCGACGCCGC GGTCAAACAG
TGTCTGCGCT CACCACTGCG GCTGACGACG AACGAGGAAC GCCAGCGCAT CGCCGAGGTG
ATCGACCGCC GCTGCGCCGA CCTCGCCGAA GCCGACCTGA TCGTGCTCGA CTACCACGAA
TGGCGCGAGG GACTGCTGCG CGGGCTGGCC GCCCACCACG CCGGCATGCT CCCGGTCTTC
CGCCACACCG TCGAGGAACT CTTCACCGCC GGGCTGGTCA AGGCCGTGTT CGCCACCGAG
ACACTGGCAT TGGGCATCAA CATGCCCGCC CGCACCGTGG TGCTCGAGAA GCTCGTCAAA
TTCAACGGCG AACAGCACAT GCCGCTGACG CCGGGGGAGT ACACCCAGCT CACCGGGCGT
GCCGGGCGGC GCGGTATCGA CGTCGAGGGA CACGCGGTGG TGCTGTGGAC CCCCGATGTG
GAACCCGTCG AGGTGGCAGG GCTGGCCTCG ACACGCACGT TCCCGCTCCG GAGTTCGTTC
GCGCCGTCGT ACAACATGAC CATCAACCTG GTGCACCAGA TGGGTCCGGC TCAGGCGCGC
CAACTGCTCG AGCAGTCGTT CGCCCAGTAC CAGGCCGACC GCTCGGTGGT GGGTCTGCGC
CGAGGCGTCG AACGCGGCGA ACGGATGCTC GACGAGATCG CCGCCGAACT CGGCGGCCGT
GACGCGCCGA TCCTCGACTA CGTCCGGCTA CGCGCGAAGA TCTCCGAACG CGAACGCGCA
CAATCCCGTT CGTCGCGGCT GCAGCGCCGC GCGGCCGCCA ACGACGCGCT CAGCGCCCTG
CGGCGTGGCG ACATCATCAG CATCACCAAC GGGCGGCGCG GGGGACTGGC CGTCGTCCTC
GAATCCGCCC GCGACACCGA CGATCCGCGG CCGCTGGTGC TGACCGAACA CCGCTGGGCC
GGCCGCATCT CCTCGGCCGA CTACACCGGC GCGACCCCGC GCGTGGGCAC CATGACGCTG
CCCAAACGGA TCGAGCACCG CAACCCTCGG GTGCGCCGCG ACCTGGCGTC GGCACTGCTC
TCGGCGGCGG CGGGGCTGGC GACGCCCGAA TCCCGGGGCC GGCGCCGGGG CGCCCAGCAA
GACGACGACA CCGACCCCGA ACTCGTATCG CTGCGTGAGC AGATGCGCCG CCACCCGGCG
CACCACCTGC CCGACCGCGA GGACAAGGTC CGCATCGCCG AGCGGTACCT GCGCATCGAA
CGGGACAACG CGCAGATCCA ACAGAAGGTC GCCGCCGCCA CCAACTCACT CGCCCGCACC
TTCGACCGGA TCGTCGTCCT CCTCGGCGAG CGCGGGTTCA TCGACACCAC CGGTGACGAC
CCGAAAGTCA CCGACGACGG CCGCCTGCTG GCCCGCATCT ACAGCGAGAG CGATCTGCTG
GTGGCGGAGT GCCTGCGCGC AGGCACCTGG GAGGGACTCG ACGCCGCAGA ACTGGCGGCG
GTGTTGTCGG CGGTGCTGTT CGAGTCCCGC GGCGACACGC CCGGCGTCCC GGCGGGGTCC
GAGGCGCCGA CGACGAAGGT GCGTCGCGCG CTGTCACAGA CCCGGCGGCT GTCGGCTGAG
CTCCGCGCCG ACGAGCGCCG TCACCGTCTC AACCCCGGCC GCGAACCCGA CGAGGGTTTC
GTCGCGGCGA TCTACCGGTG GGCGACCACG GGTGACCTGA CCACCGCGCT GGCCGCATCG
GATGCCTCCG GGGGCGGGTC ACCGCTGTCC GCGGGCGATT TCGTGCGATG GTGCCGACAG
GTGCTCGACC TGCTCGACCA GGTCCGCAAC GCCGCGCCGA CGCCCGCCCT GCGCACCGCC
GCGAAACGCG CAATCAACGA CATTCGACGC GGCGTCGTGG CAGTTGATGC GGGGTAG
 
Protein sequence
MTNPPDTQLA AFAAGMPFAL DPFQIRACEA LESGHGVLVC APTGAGKTVV GEFAVHLALA 
AGGKCFYTTP IKALSNQKHA DLVRRYGPEK IGLLTGDQSI NGDADIVVMT TEVLRNMLYA
DSPALHGLSH VVMDEVHFLA DRMRGAVWEE VILHLPDEVR LVSLSATVSN AEEFGGWIQT
VRGDTTVVVD EHRPVPLWQH VLVGKRLFDL FDYRAHSPAR SGRELVVDPE LLRHIAHRRE
ADRLADWQPR GRGRSAHRSR PTIYRPPARP DVIAALDREG LLPAITFVFS RAGCDAAVKQ
CLRSPLRLTT NEERQRIAEV IDRRCADLAE ADLIVLDYHE WREGLLRGLA AHHAGMLPVF
RHTVEELFTA GLVKAVFATE TLALGINMPA RTVVLEKLVK FNGEQHMPLT PGEYTQLTGR
AGRRGIDVEG HAVVLWTPDV EPVEVAGLAS TRTFPLRSSF APSYNMTINL VHQMGPAQAR
QLLEQSFAQY QADRSVVGLR RGVERGERML DEIAAELGGR DAPILDYVRL RAKISERERA
QSRSSRLQRR AAANDALSAL RRGDIISITN GRRGGLAVVL ESARDTDDPR PLVLTEHRWA
GRISSADYTG ATPRVGTMTL PKRIEHRNPR VRRDLASALL SAAAGLATPE SRGRRRGAQQ
DDDTDPELVS LREQMRRHPA HHLPDREDKV RIAERYLRIE RDNAQIQQKV AAATNSLART
FDRIVVLLGE RGFIDTTGDD PKVTDDGRLL ARIYSESDLL VAECLRAGTW EGLDAAELAA
VLSAVLFESR GDTPGVPAGS EAPTTKVRRA LSQTRRLSAE LRADERRHRL NPGREPDEGF
VAAIYRWATT GDLTTALAAS DASGGGSPLS AGDFVRWCRQ VLDLLDQVRN AAPTPALRTA
AKRAINDIRR GVVAVDAG