Gene Mkms_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2406 
SymbolnusB 
ID4613229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2522533 
End bp2523021 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content71% 
IMG OID639792075 
Producttranscription antitermination protein NusB 
Protein accessionYP_938394 
Protein GI119868442 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.798177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0506261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACC GCAGGCCCGA CCGGGGCCGC CACCAGGCGC GCAAACGCGC GGTCGACCTG 
CTGTTCGAGG CGGAAGCGCG CGGACTGACC GCCGCCGAGG TGGCCACGTC CCGCAACAAG
CTGGCCGGAA CCCAGCCCGA TGTGACCGCG CTGAACCCGT ACACCGTCAC CGTCGCGCGC
GGGGTCACCG ACCACCGCGA CCACATCGAC GACCTGATCT CGGCGCACCT GCAGGGCTGG
ACGCTCGATC GGCTGCCCGC CGTCGACCGC GCGATCCTGC GGGTCGCGGT GTGGGAACTG
CTGCACGCCG AGGACGTCCC AGAACCGGTC GCGGTCGACG AGGCGGTCGA ACTGGCCAAG
CAGCTGTCCA CCGACGATTC ACCCGGATTC GTCAACGGCG TGCTCGGACA GGTGATGCTC
GTGACGCCCC AGATCCGGGC GGCGTCGCAG GCGGTACGCG AATCCGCGCA GGGGCCGTCG
GAAGGCTGA
 
Protein sequence
MSDRRPDRGR HQARKRAVDL LFEAEARGLT AAEVATSRNK LAGTQPDVTA LNPYTVTVAR 
GVTDHRDHID DLISAHLQGW TLDRLPAVDR AILRVAVWEL LHAEDVPEPV AVDEAVELAK
QLSTDDSPGF VNGVLGQVML VTPQIRAASQ AVRESAQGPS EG